C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: visinin-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163032 VSNL1 9606 + 2:17539126-17657018 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295156 VSNL1-001 17540653-17656439 protein_coding
  ENST00000404666 VSNL1-003 17539126-17655528 protein_coding
  ENST00000406397 VSNL1-002 17541160-17657018 protein_coding
  ENST00000451533 VSNL1-005 17540696-17649560 protein_coding
  ENST00000457525 VSNL1-004 17539967-17649602 protein_coding
  ENST00000483921 VSNL1-006 17540707-17567707 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295156ENST00000404666ENST00000406397ENST00000451533ENST00000457525ENST00000483921
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295156 N/A 0.075±0.00 0.736±0.00 267.200±157.55 0.543±0.28 0.741±0.54 1.783±0.70 5.300±4.98 0.951±0.22 0.584±0.25 0.072±0.00 1.564±0.80 2.105±0.66 0.196±0.00
ENST00000404666 0.044±0.00 N/A N/A 88.864±0.00 0.682±0.00 0.233±0.00 N/A 0.283±0.00 0.534±0.00 N/A 0.026±0.01 5.513±5.22 3.837±3.22 0.725±0.00
ENST00000406397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.090±0.00
ENST00000451533 N/A N/A N/A 159.090±0.00 N/A N/A N/A N/A N/A N/A N/A 1.219±0.00 N/A N/A
ENST00000457525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.473±0.00
ENST00000483921 0.043±0.00 0.352±0.00 N/A N/A 0.659±0.00 N/A N/A N/A N/A 1.703±0.00 N/A N/A N/A 0.906±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0019722 IEA calcium-mediated signaling

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000023228 vsnl1a visinin-like 1a protein_coding Danio_rerio
ENSDARG00000044053 vsnl1b visinin-like 1b protein_coding Danio_rerio
ENSMUSG00000054459 Vsnl1 visinin-like 1 protein_coding Mus_musculus

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