C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cilia and flagella associated protein 221
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163075 CFAP221 9606 + 2:119544432-119662251 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295220 CFAP221-001 119544432-119656661 nonsense_mediated_decay
  ENST00000413057 CFAP221-003 119544449-119631086 nonsense_mediated_decay
  ENST00000413369 CFAP221-006 119544471-119656661 protein_coding
  ENST00000434869 CFAP221-007 119638362-119648651 protein_coding
  ENST00000442513 CFAP221-013 119544468-119562114 protein_coding
  ENST00000443972 CFAP221-002 119615624-119662251 protein_coding
  ENST00000463985 CFAP221-015 119544449-119559977 nonsense_mediated_decay
  ENST00000464578 CFAP221-008 119655965-119656660 processed_transcript
  ENST00000475569 CFAP221-011 119586692-119601445 retained_intron
  ENST00000488358 CFAP221-004 119559751-119601578 retained_intron
  ENST00000594033 CFAP221-014 119544471-119562066 nonsense_mediated_decay
  ENST00000594141 CFAP221-012 119587129-119590253 protein_coding
  ENST00000594371 CFAP221-016 119546163-119580950 protein_coding
  ENST00000597189 CFAP221-017 119602663-119627752 processed_transcript
  ENST00000598644 CFAP221-005 119544485-119573470 protein_coding
  ENST00000599827 CFAP221-010 119611661-119625802 protein_coding
  ENST00000600951 CFAP221-009 119629942-119639872 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295220ENST00000413057ENST00000413369ENST00000443972ENST00000463985ENST00000488358ENST00000594033ENST00000594371ENST00000597189ENST00000598644ENST00000599827ENST00000600951
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295220 0.016±0.00 N/A N/A N/A N/A N/A 0.025±0.00 N/A N/A N/A N/A 0.072±0.00 N/A 3.618±0.00
ENST00000413057 N/A N/A 1.261±0.00 1.366±0.00 0.204±0.00 0.096±0.00 N/A N/A 0.135±0.00 0.700±0.00 N/A N/A N/A N/A
ENST00000413369 N/A N/A N/A 0.313±0.00 N/A N/A N/A 3.287±0.00 0.145±0.00 4.371±0.00 N/A 3.364±0.00 0.170±0.06 22.813±12.91
ENST00000443972 0.041±0.00 0.286±0.00 N/A N/A N/A 0.031±0.00 0.025±0.00 N/A N/A N/A 0.018±0.00 N/A N/A N/A
ENST00000463985 0.111±0.00 N/A N/A N/A 0.708±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488358 N/A 0.421±0.00 N/A N/A 0.310±0.00 N/A 0.173±0.00 N/A N/A N/A N/A N/A 0.164±0.00 N/A
ENST00000594033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.042±0.00 0.145±0.00 N/A
ENST00000594371 N/A N/A N/A N/A N/A N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A N/A
ENST00000597189 N/A N/A N/A N/A 0.042±0.00 0.090±0.00 N/A N/A 0.170±0.00 N/A N/A 0.055±0.02 0.165±0.00 N/A
ENST00000598644 N/A N/A 1.021±0.00 N/A N/A 0.052±0.00 0.100±0.00 N/A N/A 1.165±0.00 N/A N/A N/A N/A
ENST00000599827 0.086±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.264±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093M CIL_00093M_0001 VISTA 2:119187057-119791464

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003341 IEA cilium movement
GO:0005516 IEA calmodulin binding
GO:0005929 IEA cilium
GO:0060271 IEA cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087107 CFAP221 cilia and flagella associated protein 221 protein_coding Danio_rerio
ENSMUSG00000036962 Gm101 cilia and flagella associated protein 221 protein_coding Mus_musculus

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