C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pre-B-cell leukemia homeobox interacting protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163346 PBXIP1 9606 - 1:154944076-154956123 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000368460 PBXIP1-006 154947098-154956111 protein_coding
  ENST00000368463 PBXIP1-001 154944080-154956104 protein_coding
  ENST00000368465 PBXIP1-003 154944076-154956121 protein_coding
  ENST00000490230 PBXIP1-007 154947653-154956123 nonsense_mediated_decay
  ENST00000493133 PBXIP1-004 154951229-154953757 processed_transcript
  ENST00000498553 PBXIP1-005 154947419-154953757 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000368460ENST00000368463ENST00000368465ENST00000490230ENST00000498553
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000368460 N/A N/A 3.046±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000368463 19.890±0.00 31.584±0.00 2.010±0.00 33.499±26.95 18.452±11.05 27.346±22.20 11.807±9.84 9.725±6.51 10.753±4.52 19.341±17.83 23.193±13.64 51.497±39.56 44.006±13.74 29.859±12.07
ENST00000368465 13.610±0.00 31.916±0.00 1.407±0.00 N/A 18.321±0.00 17.166±0.00 1.942±0.00 10.219±0.00 1.579±0.00 N/A 33.202±0.00 10.977±0.00 N/A 20.997±0.00
ENST00000490230 N/A N/A N/A N/A N/A 3.995±0.00 N/A 4.062±0.00 20.828±0.00 5.645±0.00 9.452±0.00 N/A N/A N/A
ENST00000498553 N/A N/A 9.798±0.00 N/A N/A N/A N/A 3.477±0.00 N/A N/A 12.143±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003714 NAS transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 NAS nucleus
GO:0005829 NAS cytosol
GO:0005874 IEA microtubule
GO:0007275 NAS multicellular organismal development
GO:0030154 NAS cell differentiation
GO:0045892 NAS negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089453 PBXIP1 pre-B-cell leukemia homeobox interacting protein 1 protein_coding Danio_rerio
ENSMUSG00000042613 Pbxip1 pre B cell leukemia transcription factor interacting protein 1 protein_coding Mus_musculus

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