C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: eukaryotic translation initiation factor 4E family member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163412 EIF4E3 9606 - 3:71675416-71754773 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295612 EIF4E3-002 71682727-71753624 protein_coding
  ENST00000389826 EIF4E3-201 71679291-71729118 protein_coding
  ENST00000421769 EIF4E3-004 71684682-71754773 protein_coding
  ENST00000425534 EIF4E3-001 71675416-71725375 protein_coding
  ENST00000448225 EIF4E3-202 71679289-71754383 protein_coding
  ENST00000468147 EIF4E3-010 71684620-71728637 processed_transcript
  ENST00000469524 EIF4E3-008 71693897-71728720 protein_coding
  ENST00000481525 EIF4E3-009 71684541-71728650 processed_transcript
  ENST00000496214 EIF4E3-005 71693875-71754383 protein_coding
  ENST00000497838 EIF4E3-007 71690041-71729197 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295612ENST00000389826ENST00000425534ENST00000448225ENST00000468147ENST00000497838
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295612 10.776±0.00 5.219±0.00 0.495±0.00 5.128±3.18 8.118±5.42 6.094±4.29 3.170±1.92 1.802±1.39 3.157±1.90 6.360±0.00 3.163±0.79 3.519±2.10 2.223±0.85 3.667±1.35
ENST00000389826 3.432±0.00 2.634±0.00 0.568±0.00 2.154±0.00 1.936±0.00 2.527±0.00 1.194±0.00 0.197±0.00 1.999±0.00 2.564±0.00 0.970±0.00 1.074±1.12 1.022±0.06 0.609±0.00
ENST00000425534 N/A 0.435±0.00 N/A 1.464±0.32 0.427±0.00 N/A 0.225±0.00 0.284±0.00 N/A N/A 0.166±0.00 0.094±0.00 N/A N/A
ENST00000448225 1.946±0.00 N/A N/A 2.374±0.00 7.870±0.00 4.677±0.00 3.145±0.00 2.317±0.00 0.921±0.00 3.669±0.00 4.266±0.00 1.799±0.00 0.877±0.00 2.350±0.00
ENST00000468147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.580±0.00 N/A N/A
ENST00000497838 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.100±0.00 N/A 2.568±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008X1 CIL_0008X1_0001 VISTA 3:71097676-71699658
CIL_0008ML CIL_0008ML_0001 VISTA 3:71150326-71751819
CIL_0008XU CIL_0008XU_0001 VISTA 3:71158318-71759723
CIL_0008EM CIL_0008EM_0001 VISTA 3:71224456-71825389
CIL_0007YY CIL_0007YY_0001 VISTA 3:71241746-71843635
CIL_00088J CIL_00088J_0001 VISTA 3:71639690-72241632
CIL_0003B1 CIL_0003B1_0001 CGP 3:71675416-71756496

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003743 IEA translation initiation factor activity
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0005845 ISS mRNA cap binding complex
GO:0006413 IEA translational initiation
GO:0006417 IEA regulation of translation
GO:0019221 TAS cytokine-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005078 eif4e3 eukaryotic translation initiation factor 4E family member 3 protein_coding Danio_rerio
ENSMUSG00000093661 Eif4e3 eukaryotic translation initiation factor 4E member 3 protein_coding Mus_musculus

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