C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 79
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163472 TMEM79 9606 + 1:156282935-156293185 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295694 TMEM79-001 156282948-156292443 protein_coding
  ENST00000357501 TMEM79-004 156282953-156291948 protein_coding
  ENST00000405535 TMEM79-201 156284279-156292443 protein_coding
  ENST00000456810 TMEM79-005 156284322-156291525 protein_coding
  ENST00000463670 TMEM79-002 156282935-156292443 processed_transcript
  ENST00000485135 TMEM79-006 156286276-156293185 processed_transcript
  ENST00000495881 TMEM79-003 156284314-156292443 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastMuscleOvaryTestisENST00000295694ENST00000405535ENST00000463670ENST00000495881
Transcript ID Brain Breast Muscle Ovary Testis
ENST00000295694 0.955±0.00 0.331±0.00 N/A 2.655±0.00 2.507±0.56
ENST00000405535 N/A N/A 0.447±0.00 5.631±4.39 N/A
ENST00000463670 0.501±0.00 N/A N/A N/A N/A
ENST00000495881 N/A N/A N/A 5.969±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000898 CIL_000898_0001 VISTA 1:155789635-156392759
CIL_0008P5 CIL_0008P5_0001 VISTA 1:155795688-156399252
CIL_0008JO CIL_0008JO_0001 VISTA 1:156202708-156805613
CIL_0000CY CIL_0000CY_0002 CGP 1:156282935-156295689

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002070 ISS epithelial cell maturation
GO:0005737 IEA cytoplasm
GO:0005765 ISS lysosomal membrane
GO:0016021 IEA integral component of membrane
GO:0031069 IEA hair follicle morphogenesis
GO:0032588 ISS trans-Golgi network membrane
GO:0042335 IEA cuticle development
GO:0045055 ISS regulated secretory pathway
GO:0045684 ISS positive regulation of epidermis development
GO:0061436 ISS establishment of skin barrier
GO:0070268 IEA cornification

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071250 tmem79a transmembrane protein 79a protein_coding Danio_rerio
ENSDARG00000076861 tmem79b transmembrane protein 79b protein_coding Danio_rerio
ENSMUSG00000001420 Tmem79 transmembrane protein 79 protein_coding Mus_musculus

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