C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GTP-binding protein 8 (putative)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163607 GTPBP8 9606 + 3:112990918-113015060 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295864 GTPBP8-004 112990987-113000960 nonsense_mediated_decay
  ENST00000383677 GTPBP8-002 112990985-113001935 protein_coding
  ENST00000383678 GTPBP8-001 112990918-113001342 protein_coding
  ENST00000467752 GTPBP8-007 112991418-113000945 protein_coding
  ENST00000473129 GTPBP8-006 112991567-113000944 protein_coding
  ENST00000485330 GTPBP8-005 112990991-113015060 nonsense_mediated_decay
  ENST00000488781 GTPBP8-008 112991009-113000919 nonsense_mediated_decay
  ENST00000618381 GTPBP8-201 112990985-113000944 protein_coding
  ENST00000619116 GTPBP8-202 112991000-113001373 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295864ENST00000383677ENST00000383678ENST00000467752ENST00000473129ENST00000485330ENST00000488781ENST00000618381
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295864 N/A N/A N/A N/A 1.947±0.86 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000383677 N/A 1.028±0.00 0.589±0.36 0.936±0.00 0.524±0.00 2.854±0.00 1.606±0.00 0.519±0.00 1.076±0.51 N/A 0.954±0.62 0.653±0.08 2.798±1.85
ENST00000383678 0.910±0.00 1.128±0.00 0.734±0.09 N/A N/A 4.286±0.00 N/A 0.957±0.29 0.715±0.18 0.462±0.22 2.072±0.56 1.683±0.85 4.218±2.97
ENST00000467752 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.471±0.00 N/A N/A N/A
ENST00000473129 N/A N/A 0.403±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485330 0.589±0.00 1.675±0.00 0.912±0.00 N/A N/A N/A N/A 0.506±0.00 0.462±0.00 0.708±0.00 0.958±0.00 0.620±0.00 N/A
ENST00000488781 N/A N/A N/A N/A 2.014±0.00 N/A 2.163±0.00 N/A N/A N/A 4.070±0.00 1.753±0.00 N/A
ENST00000618381 N/A N/A 0.761±0.00 N/A N/A N/A N/A N/A N/A 1.426±0.00 1.963±0.00 1.244±0.00 7.708±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UB CIL_0008UB_0001 VISTA 3:112792647-113397560

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000917 IEA barrier septum assembly
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005739 IEA mitochondrion
GO:0006184 IEA GTP catabolic process
GO:0015093 IEA ferrous iron transmembrane transporter activity
GO:0015684 IEA ferrous iron transport
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075033 GTPBP8 GTP-binding protein 8 (putative) protein_coding Danio_rerio
ENSMUSG00000022668 Gtpbp8 GTP-binding protein 8 (putative) protein_coding Mus_musculus

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