C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phospholipase B1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163803 PLB1 9606 + 2:28457145-28643788 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000327757 PLB1-012 28496071-28643747 protein_coding
  ENST00000404858 PLB1-001 28496119-28643152 protein_coding
  ENST00000411743 PLB1-004 28601919-28643267 nonsense_mediated_decay
  ENST00000416713 PLB1-006 28457145-28539165 protein_coding
  ENST00000422425 PLB1-201 28496071-28643788 protein_coding
  ENST00000436544 PLB1-002 28548500-28596063 protein_coding
  ENST00000436775 PLB1-011 28630586-28643267 protein_coding
  ENST00000444257 PLB1-005 28604727-28643233 nonsense_mediated_decay
  ENST00000473272 PLB1-010 28620672-28630664 retained_intron
  ENST00000479065 PLB1-009 28601887-28618452 retained_intron
  ENST00000481449 PLB1-008 28585580-28591158 retained_intron
  ENST00000485642 PLB1-007 28566443-28578147 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000327757ENST00000404858ENST00000411743ENST00000422425ENST00000436544ENST00000436775ENST00000444257ENST00000473272ENST00000479065ENST00000481449
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000327757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.304±0.00 N/A 0.249±0.03
ENST00000404858 N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A N/A N/A 0.758±0.00
ENST00000411743 0.608±0.00 0.830±0.00 N/A 0.286±0.00 0.416±0.00 0.300±0.00 N/A 0.369±0.00 N/A 0.685±0.00 N/A 0.928±0.16 1.849±0.56 0.995±0.04
ENST00000422425 N/A N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 0.036±0.00 N/A N/A 0.335±0.00 N/A
ENST00000436544 N/A N/A N/A N/A 0.110±0.00 N/A 0.050±0.00 N/A 0.105±0.00 N/A 0.049±0.00 0.424±0.37 N/A 0.411±0.00
ENST00000436775 N/A N/A 0.199±0.00 N/A 0.658±0.00 N/A N/A 0.594±0.00 0.239±0.00 N/A N/A N/A N/A N/A
ENST00000444257 0.415±0.00 0.799±0.00 N/A 0.171±0.00 0.277±0.00 N/A 0.551±0.00 N/A N/A 0.233±0.00 N/A 0.657±0.28 2.882±0.31 N/A
ENST00000473272 N/A N/A N/A N/A 0.816±0.00 N/A N/A 0.370±0.00 0.375±0.00 N/A N/A N/A 3.568±0.00 2.029±0.00
ENST00000479065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.282±0.00 N/A N/A
ENST00000481449 N/A N/A N/A N/A N/A N/A N/A N/A 0.562±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QQ CIL_0007QQ_0001 VISTA 2:28011439-28613196
CIL_0009C6 CIL_0009C6_0001 VISTA 2:28011444-28613228
CIL_00013P CIL_00013P_0001 CGP 2:28392448-28643788
CIL_00013Q CIL_00013Q_0001 CGP 2:28457145-28802940

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001523 TAS retinoid metabolic process
GO:0004622 IEA lysophospholipase activity
GO:0004623 IEA phospholipase A2 activity
GO:0005886 TAS plasma membrane
GO:0006629 IEA lipid metabolic process
GO:0006644 TAS phospholipid metabolic process
GO:0007603 TAS phototransduction, visible light
GO:0016021 IEA integral component of membrane
GO:0016042 IEA lipid catabolic process
GO:0016298 IEA lipase activity
GO:0016788 IEA hydrolase activity, acting on ester bonds
GO:0036151 TAS phosphatidylcholine acyl-chain remodeling
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process
GO:2000344 IEA positive regulation of acrosome reaction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000096445 PLB1 phospholipase B1 protein_coding Danio_rerio
ENSMUSG00000029134 Plb1 phospholipase B1 protein_coding Mus_musculus

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