C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: small integral membrane protein 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163866 SMIM12 9606 - 1:34712737-34859816 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000417239 SMIM12-006 34855689-34859045 protein_coding
  ENST00000423898 SMIM12-005 34855349-34859717 protein_coding
  ENST00000426886 SMIM12-001 34712737-34859735 nonsense_mediated_decay
  ENST00000446026 SMIM12-003 34855050-34859069 protein_coding
  ENST00000456842 SMIM12-004 34855169-34859755 protein_coding
  ENST00000521580 SMIM12-002 34852669-34859816 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000423898ENST00000446026ENST00000456842ENST00000521580
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000423898 8.553±0.00 13.318±0.00 N/A N/A 1.901±0.00 N/A N/A N/A N/A N/A N/A 10.332±0.00 6.883±0.00 5.587±0.00
ENST00000446026 N/A N/A N/A N/A N/A 0.580±0.00 N/A N/A N/A N/A N/A N/A N/A 5.555±0.00
ENST00000456842 23.983±0.00 35.287±0.00 1.995±0.00 17.987±9.39 12.955±12.01 13.550±9.05 8.261±6.88 19.817±14.49 14.668±12.16 5.256±3.74 8.178±2.47 9.203±3.99 22.814±4.37 14.899±6.71
ENST00000521580 4.458±0.00 7.971±0.00 N/A 2.573±0.68 2.579±1.70 1.254±0.19 1.662±0.77 3.180±0.99 2.331±1.04 1.404±0.31 1.413±0.02 1.901±0.50 3.091±0.48 3.094±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070358 smim12 small integral membrane protein 12 protein_coding Danio_rerio
ENSMUSG00000042380 Smim12 small integral membrane protein 12 protein_coding Mus_musculus

Loading