C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, DHHC-type containing 19
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163958 ZDHHC19 9606 - 3:196197449-196211437 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000296326 ZDHHC19-007 196197449-196211395 protein_coding
  ENST00000397544 ZDHHC19-001 196197452-196211437 nonsense_mediated_decay
  ENST00000438232 ZDHHC19-002 196197453-196211437 nonsense_mediated_decay
  ENST00000460442 ZDHHC19-006 196197452-196198910 retained_intron
  ENST00000465519 ZDHHC19-003 196197452-196211386 retained_intron
  ENST00000488508 ZDHHC19-004 196208410-196211392 processed_transcript
  ENST00000497422 ZDHHC19-005 196198394-196199652 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296326ENST00000397544ENST00000460442ENST00000497422
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296326 0.853±0.00 0.148±0.00 N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A 1.359±0.00 0.088±0.00 14.336±6.56
ENST00000397544 N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A N/A 5.898±1.14
ENST00000460442 1.785±0.00 0.087±0.00 0.483±0.00 N/A 0.521±0.00 0.088±0.00 0.098±0.00 0.632±0.00 0.896±0.12 0.118±0.00 3.768±0.42 0.321±0.06 9.954±0.00
ENST00000497422 N/A N/A 0.077±0.00 0.127±0.00 N/A N/A N/A N/A N/A 0.142±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QR CIL_0008QR_0001 VISTA 3:195819501-196421470

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IDA endoplasmic reticulum
GO:0008152 IEA metabolic process
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0019706 IEA protein-cysteine S-palmitoyltransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000052363 Zdhhc19 zinc finger, DHHC domain containing 19 protein_coding Mus_musculus

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