C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: 3-hydroxybutyrate dehydrogenase, type 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164039 BDH2 9606 - 4:103079435-103099883 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000296424 BDH2-001 103079435-103099883 protein_coding
  ENST00000464039 BDH2-003 103079479-103099808 retained_intron
  ENST00000475058 BDH2-004 103079533-103099816 retained_intron
  ENST00000492366 BDH2-002 103079477-103099828 retained_intron
  ENST00000504285 BDH2-007 103086506-103099829 protein_coding
  ENST00000506521 BDH2-008 103086478-103099870 nonsense_mediated_decay
  ENST00000509245 BDH2-006 103091185-103099870 protein_coding
  ENST00000511354 BDH2-009 103086501-103099829 nonsense_mediated_decay
  ENST00000513518 BDH2-005 103092376-103099862 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296424ENST00000464039ENST00000475058ENST00000492366
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296424 5.793±0.00 9.887±0.00 11.717±0.00 14.209±5.73 6.319±3.06 7.946±4.60 5.124±2.93 14.690±4.33 12.192±9.19 9.932±3.61 3.719±0.98 19.119±12.06 5.788±0.98 10.113±6.33
ENST00000464039 N/A N/A 0.899±0.00 N/A 0.637±0.00 N/A 0.209±0.00 N/A N/A N/A N/A 0.476±0.00 N/A N/A
ENST00000475058 N/A N/A N/A N/A 2.236±0.00 N/A N/A N/A N/A N/A 0.816±0.00 3.266±2.54 N/A 1.320±0.00
ENST00000492366 N/A N/A 0.956±0.00 N/A 1.858±0.00 1.042±0.00 1.246±0.00 3.544±0.00 N/A 2.018±0.00 N/A 2.696±1.48 N/A 1.176±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002I7 CIL_0002I7_0002 CGP 4:103019868-103099883

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003858 IDA 3-hydroxybutyrate dehydrogenase activity
GO:0005737 IDA cytoplasm
GO:0006635 IDA fatty acid beta-oxidation
GO:0008152 IEA metabolic process
GO:0008667 IEA 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity
GO:0016491 IEA oxidoreductase activity
GO:0016628 ISS oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
GO:0019290 ISS siderophore biosynthetic process
GO:0030855 IDA epithelial cell differentiation
GO:0042168 ISS heme metabolic process
GO:0051287 IDA NAD binding
GO:0055072 ISS iron ion homeostasis
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052696 bdh2 3-hydroxybutyrate dehydrogenase, type 2 protein_coding Danio_rerio
ENSMUSG00000028167 Bdh2 3-hydroxybutyrate dehydrogenase, type 2 protein_coding Mus_musculus

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