C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: progesterone receptor membrane component 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164040 PGRMC2 9606 - 4:128269237-128288829 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000296425 PGRMC2-007 128269242-128287811 protein_coding
  ENST00000394276 PGRMC2-002 128269256-128273061 protein_coding
  ENST00000503588 PGRMC2-005 128270871-128286787 protein_coding
  ENST00000503872 PGRMC2-004 128270705-128286878 protein_coding
  ENST00000509070 PGRMC2-006 128271359-128287388 nonsense_mediated_decay
  ENST00000512483 PGRMC2-003 128270612-128288203 protein_coding
  ENST00000520121 PGRMC2-001 128269242-128288829 protein_coding
  ENST00000613358 PGRMC2-201 128269237-128288822 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296425ENST00000394276ENST00000503588ENST00000503872ENST00000512483ENST00000520121
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296425 39.928±0.00 12.072±0.00 1.032±0.00 5.874±3.27 21.802±20.43 12.069±9.67 6.548±5.54 12.202±7.86 7.908±5.81 7.483±6.47 6.478±0.00 10.705±8.57 25.881±7.06 9.885±5.23
ENST00000394276 N/A N/A 1.100±0.00 N/A 1.507±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 29.412±0.00 89.609±0.00 31.788±0.00
ENST00000503872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.547±0.00 N/A 15.314±0.00
ENST00000512483 38.071±0.00 7.663±0.00 4.095±0.00 7.711±0.00 17.244±13.32 17.127±12.47 6.798±4.72 15.039±4.32 9.786±3.53 15.767±0.00 9.293±0.00 5.807±2.59 20.065±0.54 13.128±0.00
ENST00000520121 N/A N/A N/A N/A N/A N/A N/A N/A 0.887±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YG CIL_0008YG_0001 VISTA 4:128057618-128659090
CIL_0006YL CIL_0006YL_0002 CGP 4:128061268-128288829
CIL_00001N CIL_00001N_0001 CGP 4:128269237-128875224

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003707 TAS steroid hormone receptor activity
GO:0005496 IEA steroid binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0020037 IEA heme binding
GO:0043401 TAS steroid hormone mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030237 pgrmc2 progesterone receptor membrane component 2 protein_coding Danio_rerio
ENSMUSG00000049940 Pgrmc2 progesterone receptor membrane component 2 protein_coding Mus_musculus

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