C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: shisa family member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164054 SHISA5 9606 - 3:48467798-48504826 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000296444 SHISA5-001 48467798-48504431 protein_coding
  ENST00000415268 SHISA5-019 48469794-48504154 nonsense_mediated_decay
  ENST00000417841 SHISA5-017 48469728-48504140 protein_coding
  ENST00000417962 SHISA5-006 48467877-48504050 nonsense_mediated_decay
  ENST00000424965 SHISA5-016 48469463-48504165 nonsense_mediated_decay
  ENST00000426002 SHISA5-002 48467876-48473208 protein_coding
  ENST00000441507 SHISA5-020 48501179-48504140 nonsense_mediated_decay
  ENST00000442747 SHISA5-007 48467877-48504795 protein_coding
  ENST00000443308 SHISA5-009 48467911-48504129 protein_coding
  ENST00000444115 SHISA5-012 48467870-48504826 protein_coding
  ENST00000460758 SHISA5-011 48468665-48473127 retained_intron
  ENST00000465449 SHISA5-004 48467876-48473532 processed_transcript
  ENST00000466424 SHISA5-013 48467876-48469845 processed_transcript
  ENST00000486344 SHISA5-015 48469360-48479559 processed_transcript
  ENST00000490864 SHISA5-021 48501182-48504776 processed_transcript
  ENST00000494854 SHISA5-003 48467876-48473103 retained_intron
  ENST00000496408 SHISA5-018 48502361-48504802 processed_transcript
  ENST00000497863 SHISA5-014 48468768-48473079 retained_intron
  ENST00000612611 SHISA5-201 48467877-48469923 protein_coding
  ENST00000619810 SHISA5-202 48467798-48504050 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296444ENST00000417841ENST00000426002ENST00000442747ENST00000443308ENST00000444115ENST00000465449ENST00000466424ENST00000494854ENST00000612611
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296444 N/A N/A N/A N/A N/A N/A N/A N/A 1.050±0.00 N/A N/A 14.883±2.00 38.209±9.67 N/A
ENST00000417841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 75.469±0.00 N/A
ENST00000426002 36.056±0.00 25.108±0.00 1.205±0.00 8.865±6.89 12.587±7.59 26.290±0.00 3.606±3.21 9.570±6.50 13.582±0.00 25.928±0.00 4.266±0.00 17.175±14.08 51.704±22.70 12.199±8.96
ENST00000442747 N/A N/A N/A N/A N/A N/A N/A 7.599±0.00 N/A N/A N/A N/A N/A N/A
ENST00000443308 N/A N/A N/A N/A N/A 9.005±0.00 4.421±0.00 19.153±0.00 6.173±0.00 39.809±0.00 6.413±0.00 12.897±1.92 55.356±12.49 7.116±0.00
ENST00000444115 N/A N/A N/A N/A N/A N/A 0.641±0.00 N/A N/A N/A N/A N/A N/A 3.681±0.00
ENST00000465449 N/A N/A N/A N/A N/A 2.501±0.00 N/A 3.294±0.00 N/A N/A 0.671±0.00 29.400±0.00 36.501±0.00 N/A
ENST00000466424 N/A 47.119±0.00 1.257±0.00 11.069±4.17 29.347±0.00 18.222±9.93 1.107±0.00 5.635±0.00 3.580±0.00 5.241±0.00 2.338±0.00 3.938±0.00 N/A 21.066±0.00
ENST00000494854 N/A N/A N/A 4.571±0.00 1.746±0.00 N/A N/A N/A N/A 2.743±0.00 N/A N/A 25.115±0.00 3.124±0.00
ENST00000612611 37.514±0.00 38.477±0.00 N/A 7.388±0.00 24.556±0.00 12.667±0.00 7.327±0.00 16.536±0.00 16.819±0.00 67.326±0.00 3.790±0.00 20.124±0.00 80.756±0.00 11.845±6.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004871 IMP signal transducer activity
GO:0005515 IPI protein binding
GO:0005635 IEA nuclear envelope
GO:0005783 IEA endoplasmic reticulum
GO:0016021 IEA integral component of membrane
GO:0042771 IEA intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:0043123 IMP positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0050699 IPI WW domain binding
GO:0070062 IDA extracellular vesicular exosome
GO:0072332 IEA intrinsic apoptotic signaling pathway by p53 class mediator

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000025647 Shisa5 shisa family member 5 protein_coding Mus_musculus

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