C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164338 UTP15 9606 + 5:73565443-73583377 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000296792 UTP15-001 73565741-73581969 protein_coding
  ENST00000508491 UTP15-003 73565773-73580199 protein_coding
  ENST00000508686 UTP15-007 73565754-73567366 protein_coding
  ENST00000509005 UTP15-002 73565743-73580514 protein_coding
  ENST00000510478 UTP15-005 73565743-73567677 retained_intron
  ENST00000512550 UTP15-006 73572489-73578416 retained_intron
  ENST00000513824 UTP15-004 73565443-73568432 protein_coding
  ENST00000543251 UTP15-201 73565741-73583377 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296792ENST00000508491ENST00000509005ENST00000513824ENST00000543251
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296792 0.647±0.00 N/A 0.439±0.00 N/A N/A 0.364±0.00 0.604±0.00 N/A N/A 0.496±0.00 N/A 1.445±0.41 0.469±0.00 N/A
ENST00000508491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.533±0.00 N/A 5.673±0.00
ENST00000509005 1.852±0.00 4.908±0.00 1.356±0.00 2.279±0.00 3.304±0.03 2.695±1.40 1.310±0.00 2.597±0.65 2.490±1.06 2.891±0.00 2.164±0.25 2.732±0.76 2.150±1.03 3.608±0.00
ENST00000513824 N/A N/A 6.989±0.00 18.270±0.00 N/A 14.271±0.00 6.191±0.00 N/A 17.598±0.00 19.364±0.00 N/A 14.575±0.00 N/A N/A
ENST00000543251 N/A N/A N/A N/A 0.619±0.00 N/A 0.641±0.00 N/A N/A N/A N/A 1.344±0.00 0.515±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005730 IEA nucleolus
GO:0005737 IDA cytoplasm
GO:0006364 IEA rRNA processing
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002720 utp15 utp15, U3 small nucleolar ribonucleoprotein, homolog protein_coding Danio_rerio
ENSMUSG00000041747 Utp15 UTP15, U3 small nucleolar ribonucleoprotein, homolog (yeast) protein_coding Mus_musculus

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