C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: acyl-CoA synthetase long-chain family member 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164398 ACSL6 9606 - 5:131806990-132012243 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000296869 ACSL6-009 131953902-132011613 protein_coding
  ENST00000357096 ACSL6-201 131949976-132011914 protein_coding
  ENST00000379240 ACSL6-004 131953934-131994579 protein_coding
  ENST00000379244 ACSL6-008 131953907-131999624 protein_coding
  ENST00000379246 ACSL6-002 131953905-132012086 protein_coding
  ENST00000379255 ACSL6-003 131953898-132011890 protein_coding
  ENST00000379264 ACSL6-001 131949973-132011662 protein_coding
  ENST00000413683 ACSL6-006 131806990-131994278 nonsense_mediated_decay
  ENST00000414078 ACSL6-016 131989480-132012177 protein_coding
  ENST00000416557 ACSL6-019 131989450-132001881 protein_coding
  ENST00000419502 ACSL6-012 131989426-131994701 protein_coding
  ENST00000430403 ACSL6-011 131988165-132011903 protein_coding
  ENST00000431707 ACSL6-018 131954234-131994251 protein_coding
  ENST00000434099 ACSL6-005 131972787-131994253 protein_coding
  ENST00000441995 ACSL6-017 131989480-132012177 protein_coding
  ENST00000469164 ACSL6-021 131993755-132011817 retained_intron
  ENST00000477640 ACSL6-020 131993166-132012243 processed_transcript
  ENST00000484870 ACSL6-022 131971572-131975130 retained_intron
  ENST00000489047 ACSL6-007 131981859-131988090 retained_intron
  ENST00000492156 ACSL6-023 131959573-131960945 retained_intron
  ENST00000493861 ACSL6-010 131953904-131974035 retained_intron
  ENST00000543479 ACSL6-202 131954234-131994225 protein_coding
  ENST00000616644 ACSL6-203 131806993-131945698 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296869ENST00000357096ENST00000379240ENST00000379244ENST00000379246ENST00000379255ENST00000379264ENST00000430403ENST00000431707ENST00000434099ENST00000484870ENST00000489047ENST00000493861ENST00000543479
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296869 N/A N/A N/A 8.875±0.00 N/A N/A 0.314±0.00 N/A N/A N/A N/A N/A N/A 3.286±0.00
ENST00000357096 0.015±0.00 N/A N/A N/A 0.092±0.00 0.081±0.00 N/A N/A N/A N/A N/A 0.026±0.00 0.021±0.01 N/A
ENST00000379240 N/A N/A N/A N/A N/A N/A N/A 0.452±0.06 N/A N/A N/A N/A N/A N/A
ENST00000379244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.118±0.00 N/A
ENST00000379246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.087±0.00
ENST00000379255 N/A N/A N/A N/A N/A 0.095±0.00 N/A N/A N/A N/A N/A N/A N/A 2.837±0.00
ENST00000379264 N/A N/A N/A 7.375±0.20 0.031±0.00 N/A 0.237±0.00 0.368±0.11 N/A N/A N/A N/A 0.017±0.00 N/A
ENST00000430403 N/A N/A N/A N/A N/A N/A 0.523±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000431707 N/A N/A N/A N/A N/A 0.297±0.00 N/A N/A 0.416±0.00 N/A 0.053±0.00 0.198±0.11 0.115±0.00 20.286±17.11
ENST00000434099 N/A N/A N/A N/A N/A N/A N/A N/A 0.239±0.00 N/A N/A N/A 0.142±0.00 N/A
ENST00000484870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.117±0.00 N/A N/A N/A
ENST00000489047 0.012±0.00 N/A N/A N/A 0.198±0.00 0.058±0.00 N/A N/A N/A N/A 0.015±0.00 0.098±0.04 0.038±0.01 N/A
ENST00000493861 N/A 0.307±0.00 0.458±0.00 N/A 0.825±0.00 N/A N/A N/A N/A N/A N/A 0.175±0.06 N/A N/A
ENST00000543479 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.563±0.00 N/A N/A N/A 26.404±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001666 IEA response to hypoxia
GO:0001676 IDA long-chain fatty acid metabolic process
GO:0003824 IEA catalytic activity
GO:0004467 NAS long-chain fatty acid-CoA ligase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005739 IEA mitochondrion
GO:0005741 IEA mitochondrial outer membrane
GO:0005777 IEA peroxisome
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005886 NAS plasma membrane
GO:0006637 NAS acyl-CoA metabolic process
GO:0006641 IEA triglyceride metabolic process
GO:0007405 IEA neuroblast proliferation
GO:0007584 IEA response to nutrient
GO:0008152 IEA metabolic process
GO:0008654 IEA phospholipid biosynthetic process
GO:0009629 IEA response to gravity
GO:0010747 IEA positive regulation of plasma membrane long-chain fatty acid transport
GO:0010867 IEA positive regulation of triglyceride biosynthetic process
GO:0010976 IEA positive regulation of neuron projection development
GO:0015908 IEA fatty acid transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0019432 TAS triglyceride biosynthetic process
GO:0019899 IPI enzyme binding
GO:0032869 IEA cellular response to insulin stimulus
GO:0035338 TAS long-chain fatty-acyl-CoA biosynthetic process
GO:0042803 IDA protein homodimerization activity
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0048545 IEA response to steroid hormone
GO:0048666 IEA neuron development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060317 acsl6 acyl-CoA synthetase long-chain family member 6 protein_coding Danio_rerio
ENSMUSG00000020333 Acsl6 acyl-CoA synthetase long-chain family member 6 protein_coding Mus_musculus

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