C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein S14
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164587 RPS14 9606 - 5:150443190-150449756 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000312037 RPS14-005 150444238-150449696 protein_coding
  ENST00000401695 RPS14-001 150443190-150449747 protein_coding
  ENST00000407193 RPS14-201 150444231-150449756 protein_coding
  ENST00000518139 RPS14-004 150444238-150447735 nonsense_mediated_decay
  ENST00000519690 RPS14-002 150444238-150449727 retained_intron
  ENST00000519855 RPS14-007 150445424-150446937 protein_coding
  ENST00000521466 RPS14-006 150444233-150448913 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000312037ENST00000401695ENST00000519690ENST00000519855ENST00000521466
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000312037 729.353±0.00 1240.110±0.00 N/A 372.660±0.00 854.425±0.00 463.121±0.00 298.818±0.00 500.477±0.00 307.595±0.00 1196.220±0.00 280.153±0.00 N/A 159.165±0.00 671.452±0.00
ENST00000401695 87.410±0.00 127.080±0.00 2.725±0.00 19.238±14.52 87.087±0.00 8.107±0.00 1.630±0.00 19.695±15.72 6.389±0.00 5.065±0.00 5.419±0.00 5.588±0.00 447.506±0.00 114.953±26.43
ENST00000519690 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.280±0.00 N/A N/A N/A N/A
ENST00000519855 244.549±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521466 N/A N/A 22.253±0.00 80.286±0.00 66.691±0.00 96.689±0.00 38.727±0.00 76.681±0.00 101.656±0.00 80.282±0.00 101.228±0.00 1026.582±865.19 1647.105±362.85 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091Q CIL_00091Q_0001 VISTA 5:150006686-150608670
CIL_0003JB CIL_0003JB_0002 CGP 5:150443190-150558211

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000028 ISS ribosomal small subunit assembly
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 ISS RNA binding
GO:0003735 IEA structural constituent of ribosome
GO:0005730 IDA nucleolus
GO:0005739 IEA mitochondrion
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0005925 IDA focal adhesion
GO:0006412 IC:IEA translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006417 IMP regulation of translation
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022627 IDA cytosolic small ribosomal subunit
GO:0030218 IMP erythrocyte differentiation
GO:0030490 ISS maturation of SSU-rRNA
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0045182 IMP translation regulator activity
GO:0048027 IDA mRNA 5'-UTR binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036629 rps14 ribosomal protein S14 protein_coding Danio_rerio
ENSMUSG00000024608 Rps14 ribosomal protein S14 protein_coding Mus_musculus

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