C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: F-box and leucine-rich repeat protein 21 (gene/pseudogene)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164616 FBXL21 9606 + 5:135930317-135951591 polymorphic_pseudogene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000297158 FBXL21-001 135936595-135941671 polymorphic_pseudogene
  ENST00000467490 FBXL21-004 135930403-135951591 processed_transcript
  ENST00000472159 FBXL21-007 135930403-135940871 processed_transcript
  ENST00000475169 FBXL21-006 135930336-135936840 processed_transcript
  ENST00000478939 FBXL21-003 135936795-135941678 retained_intron
  ENST00000495672 FBXL21-005 135930317-135936701 processed_transcript
  ENST00000498734 FBXL21-008 135941323-135951432 processed_transcript
  ENST00000620812 FBXL21-201 135930317-135941678 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLiverLungOvaryPlacentaTestisENST00000297158ENST00000467490ENST00000472159ENST00000475169ENST00000478939ENST00000498734ENST00000620812
Transcript ID Bladder Brain Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000297158 0.768±0.00 N/A 0.081±0.00 N/A 0.343±0.00 N/A 0.071±0.00 0.123±0.09 N/A
ENST00000467490 N/A N/A N/A 0.204±0.00 N/A N/A N/A N/A N/A
ENST00000472159 N/A N/A N/A N/A N/A 0.031±0.00 N/A N/A N/A
ENST00000475169 N/A N/A N/A N/A N/A N/A 0.342±0.00 N/A N/A
ENST00000478939 N/A 0.077±0.04 N/A N/A 0.070±0.00 N/A 0.033±0.00 N/A N/A
ENST00000498734 N/A 0.118±0.00 N/A N/A 4.221±0.00 N/A N/A 0.069±0.00 1.129±0.00
ENST00000620812 N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005XY CIL_0005XY_0001 CGP 5:135922279-136063818

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005829 IEA cytosol
GO:0019005 IEA SCF ubiquitin ligase complex
GO:0043153 IEA entrainment of circadian clock by photoperiod

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037738 FBXL21 F-box and leucine-rich repeat protein 21 (gene/pseudogene) protein_coding Danio_rerio
ENSMUSG00000035509 Fbxl21 F-box and leucine-rich repeat protein 21 protein_coding Mus_musculus

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