C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: integrator complex subunit 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164880 INTS1 9606 - 7:1470277-1504367 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000404767 INTS1-001 1470277-1504367 protein_coding
  ENST00000468115 INTS1-003 1482278-1493867 retained_intron
  ENST00000479671 INTS1-004 1471171-1471761 retained_intron
  ENST00000482994 INTS1-006 1474200-1476150 retained_intron
  ENST00000483196 INTS1-008 1471133-1473150 protein_coding
  ENST00000493446 INTS1-007 1470478-1473125 processed_transcript
  ENST00000493531 INTS1-005 1499528-1501279 processed_transcript
  ENST00000496988 INTS1-009 1494456-1496212 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000404767ENST00000468115ENST00000493446
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000404767 14.424±0.00 14.656±0.00 2.229±0.00 8.480±5.52 7.669±7.35 3.916±2.18 4.923±3.63 5.790±4.06 4.163±2.89 3.883±2.78 20.801±15.83 13.286±8.33 13.143±2.01 30.940±7.87
ENST00000468115 N/A N/A N/A N/A 0.548±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493446 N/A N/A N/A N/A N/A 15.957±0.00 N/A N/A N/A N/A N/A 24.604±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008V5 CIL_0008V5_0001 VISTA 7:925518-1526682
CIL_0008DL CIL_0008DL_0001 VISTA 7:928196-1529533
CIL_0000ZP CIL_0000ZP_0001 CGP 7:1428465-1504367
CIL_0002H7 CIL_0002H7_0002 CGP 7:1470277-1543043

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001832 IEA blastocyst growth
GO:0001833 IEA inner cell mass cell proliferation
GO:0005488 IEA binding
GO:0005634 IEA nucleus
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016180 IDA snRNA processing
GO:0032039 IDA integrator complex
GO:0034474 IEA U2 snRNA 3'-end processing
GO:0043066 IEA negative regulation of apoptotic process
GO:0043154 IEA negative regulation of cysteine-type endopeptidase activity involved in apoptotic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059631 ints1 integrator complex subunit 1 protein_coding Danio_rerio
ENSMUSG00000029547 Ints1 integrator complex subunit 1 protein_coding Mus_musculus

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