C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: claudin 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165215 CLDN3 9606 - 7:73768997-73770270 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000395145 CLDN3-001 73768997-73770270 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000395145
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000395145 0.814±0.00 0.195±0.00 0.722±0.00 0.187±0.08 9.950±5.40 23.036±8.18 18.334±16.36 14.851±0.00 14.312±14.03 55.742±61.97 9.012±3.57 2.084±1.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00052N CIL_00052N_0002 CGP 7:73736094-73770270

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001666 IEP response to hypoxia
GO:0004888 TAS transmembrane signaling receptor activity
GO:0005198 IEA structural molecule activity
GO:0005515 IEA protein binding
GO:0005887 TAS integral component of plasma membrane
GO:0005923 IEA tight junction
GO:0007165 TAS signal transduction
GO:0016021 TAS:IEA integral component of membrane
GO:0016328 IEA lateral plasma membrane
GO:0016338 IEA calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules
GO:0042802 IEA identical protein binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015955 cldnc claudin c protein_coding Danio_rerio
ENSDARG00000069503 cldnh claudin h protein_coding Danio_rerio
ENSMUSG00000070473 Cldn3 claudin 3 protein_coding Mus_musculus

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