C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleolar protein 6 (RNA-associated)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165271 NOL6 9606 - 9:33461441-33473930 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000297990 NOL6-004 33461452-33473930 protein_coding
  ENST00000353159 NOL6-006 33461441-33473930 protein_coding
  ENST00000379470 NOL6-002 33461452-33465194 protein_coding
  ENST00000379471 NOL6-005 33461452-33473930 protein_coding
  ENST00000464829 NOL6-001 33462114-33473902 processed_transcript
  ENST00000496319 NOL6-003 33470416-33472681 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000297990ENST00000353159ENST00000379470ENST00000379471ENST00000464829
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000297990 6.061±0.00 5.364±0.00 0.236±0.00 3.250±2.52 3.221±1.39 1.520±0.57 1.840±1.34 2.678±2.42 2.930±1.72 3.603±0.00 5.614±5.45 6.932±4.86 5.351±1.73 5.519±0.30
ENST00000353159 N/A 3.905±0.00 N/A 0.471±0.00 N/A N/A N/A 0.574±0.00 N/A N/A N/A 5.817±0.00 3.734±0.00 4.028±0.00
ENST00000379470 N/A 5.215±0.00 N/A 3.506±0.00 N/A 1.740±0.00 0.223±0.00 2.617±0.00 4.869±0.00 N/A N/A 4.174±2.29 5.393±3.67 8.977±5.15
ENST00000379471 N/A N/A N/A 1.150±0.00 N/A N/A 0.435±0.00 N/A N/A 0.327±0.00 0.354±0.00 N/A N/A N/A
ENST00000464829 N/A N/A N/A 0.780±0.00 1.119±0.00 N/A N/A 0.765±0.00 N/A 0.926±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AT CIL_0006AT_0001 CGP 9:33441154-33473930

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000794 ISS condensed nuclear chromosome
GO:0003723 ISS RNA binding
GO:0005634 IDA nucleus
GO:0005730 ISS nucleolus
GO:0005739 IDA mitochondrion
GO:0006364 ISS rRNA processing
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059711 nol6 nucleolar protein family 6 (RNA-associated) protein_coding Danio_rerio
ENSMUSG00000028430 Nol6 nucleolar protein family 6 (RNA-associated) protein_coding Mus_musculus

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