C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: catechol-O-methyltransferase domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165644 COMTD1 9606 - 10:75233969-75236030 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372538 COMTD1-001 75233969-75236011 protein_coding
  ENST00000460899 COMTD1-005 75233971-75235730 processed_transcript
  ENST00000469299 COMTD1-004 75233984-75235925 protein_coding
  ENST00000470947 COMTD1-006 75233984-75235512 processed_transcript
  ENST00000490521 COMTD1-007 75234426-75235336 processed_transcript
  ENST00000491270 COMTD1-002 75235315-75236030 processed_transcript
  ENST00000494596 COMTD1-003 75233978-75235936 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372538ENST00000460899ENST00000469299ENST00000470947ENST00000490521ENST00000494596
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372538 5.726±0.00 0.886±0.00 0.245±0.00 N/A 1.703±0.00 0.942±0.76 0.165±0.00 N/A 5.411±0.00 0.200±0.00 2.244±0.00 9.049±7.92 7.190±1.46 1.181±0.80
ENST00000460899 N/A N/A N/A 0.482±0.00 0.858±0.13 1.121±0.00 N/A N/A N/A 0.345±0.00 N/A 7.172±0.00 N/A N/A
ENST00000469299 N/A 0.806±0.00 N/A N/A 0.312±0.00 N/A 7.923±0.00 10.567±8.61 14.136±0.00 8.670±0.00 5.021±0.00 N/A N/A N/A
ENST00000470947 N/A N/A N/A N/A N/A 1.223±0.00 N/A 12.084±0.00 1.199±0.00 2.917±0.00 2.556±0.00 1.537±0.00 4.683±2.37 0.443±0.00
ENST00000490521 N/A 1.536±0.00 N/A N/A N/A N/A N/A N/A N/A 0.247±0.00 N/A N/A N/A 1.142±0.30
ENST00000494596 N/A N/A 1.577±0.00 3.387±0.70 2.138±1.14 N/A 1.853±1.78 1.113±0.00 7.648±0.00 6.169±0.00 1.333±0.00 2.636±1.60 N/A 1.178±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JX CIL_0007JX_0001 UCNEbase 10:74418410-76978156
CIL_0008UO CIL_0008UO_0001 VISTA 10:74941035-75542526
CIL_000925 CIL_000925_0001 VISTA 10:74961440-75563087
CIL_00084B CIL_00084B_0001 VISTA 10:75078488-75679926
CIL_0008K8 CIL_0008K8_0001 VISTA 10:75104806-75705881
CIL_0007IL CIL_0007IL_0001 CGP 10:75210154-75236030
CIL_0007IE CIL_0007IE_0001 CGP 10:75233969-75401906

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0008171 IEA O-methyltransferase activity
GO:0016021 IEA integral component of membrane
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078918 comtd1 catechol-O-methyltransferase domain containing 1 protein_coding Danio_rerio
ENSMUSG00000021773 Comtd1 catechol-O-methyltransferase domain containing 1 protein_coding Mus_musculus

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