C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166136 NDUFB8 9606 - 10:100523740-100530000 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000299166 NDUFB8-005 100523740-100529864 protein_coding
  ENST00000370320 NDUFB8-003 100523937-100529864 protein_coding
  ENST00000370322 NDUFB8-006 100523743-100530000 protein_coding
  ENST00000464651 NDUFB8-001 100523740-100526598 retained_intron
  ENST00000466088 NDUFB8-004 100526049-100529862 retained_intron
  ENST00000528425 NDUFB8-010 100524033-100529870 nonsense_mediated_decay
  ENST00000529437 NDUFB8-007 100526717-100529883 retained_intron
  ENST00000531189 NDUFB8-009 100529043-100529879 retained_intron
  ENST00000531418 NDUFB8-008 100526744-100529879 retained_intron

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000299166ENST00000464651ENST00000466088
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000299166 98.090±0.00 160.945±0.00 12.145±0.00 153.317±59.38 124.483±0.00 109.776±70.50 90.729±58.53 107.336±68.80 70.003±36.76 50.896±37.82 47.134±1.26 128.575±67.11 111.180±25.53 132.320±0.00
ENST00000464651 N/A N/A 21.870±0.00 N/A N/A N/A N/A N/A N/A N/A 44.449±0.00 N/A N/A N/A
ENST00000466088 N/A N/A N/A N/A 10.150±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QB CIL_0007QB_0001 VISTA 10:100185085-100786577
CIL_00082U CIL_00082U_0001 VISTA 10:100312457-100914449
CIL_00082V CIL_00082V_0001 VISTA 10:100315129-100915721
CIL_00093R CIL_00093R_0001 VISTA 10:100355158-100955821
CIL_00093O CIL_00093O_0001 VISTA 10:100359362-100959974
CIL_0008BC CIL_0008BC_0001 VISTA 10:100387324-100989228
CIL_0001CC CIL_0001CC_0002 CGP 10:100486642-100529881
CIL_0008BD CIL_0008BD_0001 VISTA 10:100486833-101088338
CIL_0007U1 CIL_0007U1_0001 VISTA 10:100491715-101092615
CIL_0005DQ CIL_0005DQ_0001 CGP 10:100523740-100559998

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003954 IEA NADH dehydrogenase activity
GO:0005739 IEA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0005747 IDA:IEA mitochondrial respiratory chain complex I
GO:0005783 IDA endoplasmic reticulum
GO:0006120 NAS:IEA mitochondrial electron transport, NADH to ubiquinone
GO:0008137 IEA:NAS NADH dehydrogenase (ubiquinone) activity
GO:0016021 IEA integral component of membrane
GO:0022904 TAS respiratory electron transport chain
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010113 ndufb8 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8 protein_coding Danio_rerio
ENSMUSG00000025204 Ndufb8 NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 protein_coding Mus_musculus

Loading