C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEP domain containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166153 DEPDC4 9606 - 12:100203669-100267079 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000299185 DEPDC4-003 100252480-100267079 nonsense_mediated_decay
  ENST00000378244 DEPDC4-006 100203669-100267079 nonsense_mediated_decay
  ENST00000416321 DEPDC4-001 100252263-100267079 protein_coding
  ENST00000547823 DEPDC4-009 100241735-100252305 processed_transcript
  ENST00000548313 DEPDC4-008 100252458-100262356 protein_coding
  ENST00000549100 DEPDC4-010 100237800-100252279 processed_transcript
  ENST00000549249 DEPDC4-005 100252480-100267079 protein_coding
  ENST00000549341 DEPDC4-004 100252480-100267079 nonsense_mediated_decay
  ENST00000550587 DEPDC4-002 100252480-100267079 protein_coding
  ENST00000551642 DEPDC4-007 100255873-100267055 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyTestisENST00000299185ENST00000550587
Transcript ID Kidney Testis
ENST00000299185 N/A 4.459±0.00
ENST00000550587 0.624±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016J CIL_00016J_0002 CGP 12:100203669-100341724

Gene Ontology

GO IDEvidence TypeGO Description
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089908 DEPDC4 DEP domain containing 4 protein_coding Danio_rerio

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