C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polymerase (DNA directed), lambda
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166169 POLL 9606 - 10:101578882-101588270 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000299206 POLL-005 101578882-101588209 protein_coding
  ENST00000339310 POLL-010 101578882-101588126 protein_coding
  ENST00000370162 POLL-201 101578884-101588270 protein_coding
  ENST00000370168 POLL-013 101578882-101583193 protein_coding
  ENST00000370169 POLL-008 101578882-101587421 protein_coding
  ENST00000370172 POLL-012 101578882-101588248 protein_coding
  ENST00000413344 POLL-002 101584687-101588230 protein_coding
  ENST00000415897 POLL-004 101579515-101587406 protein_coding
  ENST00000426919 POLL-001 101583602-101587405 protein_coding
  ENST00000429502 POLL-009 101579696-101588232 protein_coding
  ENST00000430045 POLL-015 101585324-101588232 protein_coding
  ENST00000454524 POLL-003 101584611-101587200 protein_coding
  ENST00000461587 POLL-016 101584794-101588242 processed_transcript
  ENST00000463515 POLL-014 101578882-101582225 processed_transcript
  ENST00000470140 POLL-011 101580252-101588228 processed_transcript
  ENST00000485369 POLL-007 101579675-101584919 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000299206ENST00000339310ENST00000370162ENST00000370168ENST00000370169ENST00000370172ENST00000413344ENST00000426919ENST00000429502ENST00000463515ENST00000485369
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000299206 N/A N/A 0.459±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.233±0.32 8.868±0.00
ENST00000339310 2.106±0.00 2.611±0.00 N/A 4.627±0.00 3.254±0.00 N/A N/A N/A N/A N/A N/A 4.601±0.00 2.553±0.00 9.158±0.00
ENST00000370162 0.985±0.00 1.648±0.00 N/A N/A N/A N/A N/A N/A N/A 2.485±0.00 1.860±0.00 N/A N/A N/A
ENST00000370168 N/A N/A N/A N/A N/A 1.042±0.00 N/A N/A 2.515±0.00 N/A N/A 8.136±0.53 2.616±0.00 N/A
ENST00000370169 N/A N/A N/A N/A N/A 2.484±0.00 2.739±0.00 5.272±0.00 2.265±0.00 3.986±0.00 N/A 8.046±0.00 1.503±0.00 N/A
ENST00000370172 1.185±0.00 N/A N/A N/A 3.974±0.00 4.484±0.00 N/A N/A N/A N/A N/A N/A 2.365±0.00 N/A
ENST00000413344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.331±0.00 N/A N/A N/A
ENST00000426919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.074±0.00 N/A N/A N/A
ENST00000429502 N/A N/A 2.954±0.00 N/A N/A 1.219±0.00 N/A N/A 1.664±0.00 1.186±0.00 N/A 1.844±0.00 N/A N/A
ENST00000463515 N/A 1.229±0.00 N/A N/A 0.804±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485369 N/A N/A N/A N/A N/A 6.718±0.00 N/A 0.810±0.00 N/A N/A 1.687±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZR CIL_0007ZR_0001 VISTA 10:101034855-101635629
CIL_00089J CIL_00089J_0001 VISTA 10:101185253-101786853
CIL_000942 CIL_000942_0001 VISTA 10:101206892-101808215
CIL_00099F CIL_00099F_0001 VISTA 10:101467436-102068636
CIL_00099E CIL_00099E_0001 VISTA 10:101480423-102081273
CIL_00007N CIL_00007N_0002 CGP 10:101570560-101609668

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA:NAS DNA binding
GO:0003887 NAS:IEA DNA-directed DNA polymerase activity
GO:0005634 IEA:NAS nucleus
GO:0006260 NAS DNA replication
GO:0006281 IEA DNA repair
GO:0006289 IDA nucleotide-excision repair
GO:0016446 NAS somatic hypermutation of immunoglobulin genes
GO:0016829 IEA lyase activity
GO:0034061 IEA DNA polymerase activity
GO:0046872 IEA metal ion binding
GO:0071897 IEA DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039613 poll polymerase (DNA directed), lambda protein_coding Danio_rerio
ENSMUSG00000025218 Poll polymerase (DNA directed), lambda protein_coding Mus_musculus

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