C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromodomain protein, Y-like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166446 CDYL2 9606 - 16:80597906-80804329 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000561616 CDYL2-006 80612640-80639736 protein_coding
  ENST00000562753 CDYL2-005 80684604-80735133 processed_transcript
  ENST00000562812 CDYL2-004 80603916-80804263 protein_coding
  ENST00000563890 CDYL2-002 80603916-80804263 protein_coding
  ENST00000566173 CDYL2-003 80603916-80804263 protein_coding
  ENST00000567924 CDYL2-007 80632637-80633180 processed_transcript
  ENST00000570137 CDYL2-001 80597906-80804329 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000562753ENST00000562812ENST00000563890ENST00000566173ENST00000567924ENST00000570137
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000562753 N/A N/A N/A N/A N/A N/A 0.414±0.00 2.569±0.00 N/A N/A 3.312±0.00 N/A N/A
ENST00000562812 N/A N/A N/A N/A N/A N/A N/A N/A 0.834±0.00 0.084±0.00 N/A N/A N/A
ENST00000563890 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.084±0.00 N/A N/A N/A
ENST00000566173 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.084±0.00 N/A N/A N/A
ENST00000567924 N/A N/A N/A N/A N/A N/A 0.879±0.00 N/A N/A N/A N/A N/A N/A
ENST00000570137 2.430±0.00 1.089±0.00 0.726±0.00 1.105±0.40 0.662±0.14 0.231±0.17 0.077±0.00 0.854±0.16 0.829±0.30 0.016±0.00 0.993±0.07 2.178±1.14 4.567±2.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MS CIL_0008MS_0001 VISTA 16:80038696-80639858
CIL_0008HN CIL_0008HN_0001 VISTA 16:80089446-80690755
CIL_0001Q8 CIL_0001Q8_0001 CGP 16:80540734-80804329
CIL_0001PZ CIL_0001PZ_0001 CGP 16:80597906-81020270

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0008152 IEA metabolic process
GO:0035064 IEA methylated histone binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000031758 Cdyl2 chromodomain protein, Y chromosome-like 2 protein_coding Mus_musculus

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