C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 143
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166478 ZNF143 9606 + 11:9460319-9528524 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000299606 ZNF143-003 9461023-9528281 protein_coding
  ENST00000396597 ZNF143-010 9460987-9527646 protein_coding
  ENST00000396602 ZNF143-001 9460965-9528524 protein_coding
  ENST00000396604 ZNF143-007 9460522-9528054 protein_coding
  ENST00000412390 ZNF143-006 9461057-9478446 protein_coding
  ENST00000414370 ZNF143-004 9461648-9473986 protein_coding
  ENST00000417726 ZNF143-005 9462002-9473954 protein_coding
  ENST00000438144 ZNF143-014 9461006-9478586 protein_coding
  ENST00000447186 ZNF143-009 9512497-9525479 protein_coding
  ENST00000496276 ZNF143-002 9461012-9478434 nonsense_mediated_decay
  ENST00000526657 ZNF143-015 9461013-9478518 protein_coding
  ENST00000527597 ZNF143-018 9471107-9472716 retained_intron
  ENST00000530463 ZNF143-008 9460976-9527613 protein_coding
  ENST00000531943 ZNF143-011 9460319-9478424 protein_coding
  ENST00000532305 ZNF143-017 9525221-9527952 retained_intron
  ENST00000532577 ZNF143-013 9460985-9478472 protein_coding
  ENST00000533542 ZNF143-012 9460982-9479522 protein_coding
  ENST00000534265 ZNF143-016 9461027-9478541 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000299606ENST00000396597ENST00000396602ENST00000396604ENST00000530463ENST00000532305
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000299606 1.799±0.00 2.771±0.00 0.645±0.00 1.026±0.00 1.531±0.00 3.442±0.00 0.687±0.20 1.154±0.88 N/A 1.792±1.21 4.252±0.00 2.234±0.23 1.074±0.38 2.708±0.00
ENST00000396597 0.937±0.00 N/A 0.618±0.00 1.276±0.00 1.957±0.92 1.336±0.00 0.257±0.00 1.085±0.00 0.513±0.00 0.665±0.00 3.051±0.00 1.944±0.38 3.646±0.00 18.859±0.00
ENST00000396602 N/A 0.998±0.00 N/A N/A N/A N/A 0.646±0.00 N/A 1.014±0.00 N/A N/A 3.204±1.37 1.026±0.23 2.902±1.06
ENST00000396604 1.036±0.00 N/A N/A 1.836±0.00 0.734±0.00 2.940±0.00 0.843±0.00 N/A 0.460±0.00 N/A N/A N/A N/A 4.433±0.00
ENST00000530463 N/A N/A N/A 0.525±0.00 1.578±0.00 3.194±0.00 N/A N/A N/A 1.834±1.21 N/A 2.600±0.00 1.663±0.00 N/A
ENST00000532305 N/A N/A N/A N/A 3.620±0.00 4.371±0.00 N/A N/A 1.411±0.00 7.181±0.00 N/A 4.814±0.00 4.361±0.00 6.250±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CP CIL_0009CP_0001 VISTA 11:9311967-9915183
CIL_00070N CIL_00070N_0001 CGP 11:9460319-9593457

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006359 TAS regulation of transcription from RNA polymerase III promoter
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006383 TAS transcription from RNA polymerase III promoter
GO:0010467 TAS gene expression
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012887 znf143a zinc finger protein 143a protein_coding Danio_rerio
ENSDARG00000041581 znf143b zinc finger protein 143b protein_coding Danio_rerio
ENSDARG00000093864 wee1 WEE1 homolog (S. pombe) protein_coding Danio_rerio
ENSMUSG00000061079 Zfp143 zinc finger protein 143 protein_coding Mus_musculus

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