C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 96, member B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166595 FAM96B 9606 - 16:66932055-66934423 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000422424 FAM96B-001 66932055-66934400 protein_coding
  ENST00000562362 FAM96B-003 66932066-66934382 nonsense_mediated_decay
  ENST00000563490 FAM96B-004 66932186-66934417 retained_intron
  ENST00000567511 FAM96B-002 66932067-66934362 protein_coding
  ENST00000568572 FAM96B-006 66932065-66934250 protein_coding
  ENST00000569299 FAM96B-005 66933469-66934423 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000422424ENST00000563490ENST00000568572ENST00000569299
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000422424 30.561±0.00 44.767±0.00 3.732±0.00 17.302±12.47 18.037±14.29 17.668±15.41 26.933±22.73 35.135±29.04 31.104±28.03 31.632±27.64 74.185±63.97 48.258±33.37 72.190±19.78 54.348±16.06
ENST00000563490 4.978±0.00 13.163±0.00 N/A 18.766±0.00 10.303±0.00 8.607±8.12 N/A 17.755±0.00 8.617±0.00 20.567±0.00 N/A N/A N/A 23.768±0.00
ENST00000568572 N/A N/A N/A 7.528±0.00 N/A 16.187±0.00 N/A 23.934±0.00 N/A N/A N/A 14.804±0.00 15.349±0.00 N/A
ENST00000569299 N/A N/A N/A N/A N/A N/A N/A N/A 1.004±0.00 N/A 3.380±0.00 N/A N/A 10.430±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WN CIL_0007WN_0001 VISTA 16:66603173-67205657
CIL_0003LW CIL_0003LW_0002 CGP 16:66921679-66934423
CIL_0006Z3 CIL_0006Z3_0001 CGP 16:66932055-66945096

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005819 IDA spindle
GO:0007059 IMP chromosome segregation
GO:0044281 TAS small molecule metabolic process
GO:0071817 IDA MMXD complex
GO:0097361 IDA CIA complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052010 fam96b family with sequence similarity 96, member B protein_coding Danio_rerio
ENSMUSG00000031879 Fam96b family with sequence similarity 96, member B protein_coding Mus_musculus

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