C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dynactin 5 (p25)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166847 DCTN5 9606 + 16:23641392-23677455 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000300087 DCTN5-001 23641392-23677455 protein_coding
  ENST00000563188 DCTN5-006 23641513-23665693 nonsense_mediated_decay
  ENST00000563614 DCTN5-002 23666468-23669872 retained_intron
  ENST00000563998 DCTN5-009 23641471-23667371 protein_coding
  ENST00000566053 DCTN5-008 23641476-23667218 nonsense_mediated_decay
  ENST00000566298 DCTN5-004 23642587-23665701 protein_coding
  ENST00000568272 DCTN5-003 23641529-23651147 protein_coding
  ENST00000568589 DCTN5-005 23641511-23666017 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000300087ENST00000563614ENST00000563998ENST00000568589
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000300087 0.800±0.00 1.042±0.00 1.080±0.00 5.902±0.87 1.793±0.11 1.819±0.00 0.492±0.06 2.266±0.00 0.669±0.31 0.633±0.07 N/A 1.723±1.04 1.657±0.34 3.407±1.24
ENST00000563614 6.500±0.00 6.801±0.00 1.475±0.00 N/A 5.036±0.42 5.442±1.21 2.650±1.10 5.734±4.68 3.163±0.29 3.735±1.18 1.842±0.70 5.124±1.39 9.482±2.85 6.335±0.00
ENST00000563998 N/A N/A 3.995±0.00 N/A N/A N/A 3.530±0.61 N/A N/A 6.695±0.00 N/A N/A 11.483±0.00 N/A
ENST00000568589 N/A N/A N/A N/A N/A N/A N/A 2.554±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006D1 CIL_0006D1_0001 CGP 16:23603160-23677455
CIL_0006D0 CIL_0006D0_0001 CGP 16:23641392-23690367

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003573 dctn5 dynactin 5 protein_coding Danio_rerio
ENSMUSG00000030868 Dctn5 dynactin 5 protein_coding Mus_musculus

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