C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myosin IA
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166866 MYO1A 9606 - 12:57028517-57051198 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000300119 MYO1A-001 57028517-57050117 protein_coding
  ENST00000433964 MYO1A-002 57047663-57051175 protein_coding
  ENST00000442789 MYO1A-004 57028517-57050765 protein_coding
  ENST00000471791 MYO1A-005 57047931-57051198 processed_transcript
  ENST00000476795 MYO1A-006 57038438-57039440 processed_transcript
  ENST00000477864 MYO1A-008 57029366-57031086 processed_transcript
  ENST00000487083 MYO1A-007 57029963-57031087 retained_intron
  ENST00000492945 MYO1A-003 57041463-57050827 protein_coding
  ENST00000554234 MYO1A-009 57028618-57047830 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000300119ENST00000433964ENST00000476795ENST00000477864ENST00000487083ENST00000492945ENST00000554234
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000300119 N/A N/A N/A N/A 1.249±0.00 5.023±3.94 N/A N/A N/A 0.079±0.00 N/A 1.967±0.97 0.182±0.00
ENST00000433964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.130±0.00 N/A N/A
ENST00000476795 0.056±0.00 N/A N/A N/A N/A N/A N/A N/A 0.558±0.00 N/A N/A N/A N/A
ENST00000477864 N/A N/A N/A N/A N/A N/A N/A 0.290±0.00 N/A N/A N/A N/A N/A
ENST00000487083 N/A 0.330±0.00 N/A N/A 0.043±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492945 N/A N/A N/A N/A N/A N/A 0.283±0.00 0.734±0.00 N/A N/A N/A N/A N/A
ENST00000554234 0.059±0.00 N/A 0.075±0.00 0.175±0.00 0.020±0.00 0.895±0.00 0.005±0.00 N/A N/A N/A 0.016±0.00 0.025±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005902 IDA microvillus
GO:0005903 IDA brush border
GO:0007605 IMP sensory perception of sound
GO:0008152 IEA metabolic process
GO:0009925 IEA basal plasma membrane
GO:0016323 IDA basolateral plasma membrane
GO:0016324 IEA apical plasma membrane
GO:0016328 IDA lateral plasma membrane
GO:0016459 IEA myosin complex
GO:0030030 IEA cell projection organization
GO:0030033 IEA microvillus assembly
GO:0030864 IDA cortical actin cytoskeleton
GO:0031941 IDA filamentous actin
GO:0051648 IMP vesicle localization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000025401 Myo1a myosin IA protein_coding Mus_musculus

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