C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 178
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166960 CCDC178 9606 - 18:32937402-33441101 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000300227 CCDC178-001 32937625-33440721 protein_coding
  ENST00000383096 CCDC178-002 32937407-33440693 protein_coding
  ENST00000399177 CCDC178-005 33333179-33440082 non_stop_decay
  ENST00000403303 CCDC178-201 32937403-33440081 protein_coding
  ENST00000406524 CCDC178-202 32937672-33412112 protein_coding
  ENST00000577268 CCDC178-012 33323151-33346222 retained_intron
  ENST00000577766 CCDC178-010 33370087-33441101 protein_coding
  ENST00000579916 CCDC178-008 32937664-33440045 protein_coding
  ENST00000579947 CCDC178-003 32958003-33440693 protein_coding
  ENST00000581524 CCDC178-009 32937406-33266965 protein_coding
  ENST00000581852 CCDC178-007 32937402-33136077 protein_coding
  ENST00000583550 CCDC178-011 33437633-33440543 processed_transcript
  ENST00000583930 CCDC178-006 32937672-33440018 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000300227ENST00000399177ENST00000403303ENST00000406524ENST00000577268ENST00000579916ENST00000579947ENST00000581524ENST00000581852
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000300227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.343±0.00
ENST00000399177 N/A N/A 0.139±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000403303 N/A N/A N/A N/A 0.015±0.00 N/A N/A N/A N/A 0.128±0.03 N/A N/A
ENST00000406524 N/A N/A N/A 0.090±0.00 N/A N/A N/A N/A N/A 0.425±0.00 N/A N/A
ENST00000577268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A
ENST00000579916 N/A 0.089±0.00 N/A N/A N/A N/A N/A 0.335±0.00 0.129±0.00 N/A N/A N/A
ENST00000579947 N/A N/A 0.016±0.00 N/A N/A N/A N/A N/A 0.038±0.00 N/A N/A N/A
ENST00000581524 N/A N/A 0.013±0.00 N/A N/A 0.026±0.00 N/A N/A N/A 0.056±0.05 0.082±0.00 N/A
ENST00000581852 1.583±0.00 0.028±0.00 N/A 1.661±0.00 0.666±0.64 0.093±0.00 0.395±0.00 0.105±0.00 N/A 1.714±0.44 0.072±0.02 4.467±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000156 CIL_000156_0001 CGP 18:32672671-33441101
CIL_0007M0 CIL_0007M0_0002 UCNEbase 18:32878586-33183532
CIL_0004PA CIL_0004PA_0001 CGP 18:32937402-33751192

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090429 CCDC178 coiled-coil domain containing 178 protein_coding Danio_rerio
ENSMUSG00000024306 Ccdc178 coiled coil domain containing 178 protein_coding Mus_musculus

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