C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 27 (fatty acid transporter), member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167114 SLC27A4 9606 + 9:128340646-128361470 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000300456 SLC27A4-001 128340728-128361470 protein_coding
  ENST00000372870 SLC27A4-002 128340646-128361217 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000300456ENST00000372870
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000300456 5.612±0.00 4.170±0.00 1.672±0.00 5.094±2.48 3.892±3.31 3.320±0.60 2.234±2.06 9.571±8.74 9.704±0.00 2.279±1.57 4.678±4.22 6.712±2.73 7.073±2.00 15.389±1.21
ENST00000372870 2.338±0.00 7.540±0.00 N/A 4.739±0.00 3.241±2.99 5.753±0.00 2.219±0.00 12.958±0.00 8.106±0.00 N/A N/A 4.545±1.17 2.492±0.60 9.372±1.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007E7 CIL_0007E7_0001 CGP 9:128322536-128361470
CIL_0007EA CIL_0007EA_0001 CGP 9:128340646-128392016

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000038 IEA very long-chain fatty acid metabolic process
GO:0000166 IEA nucleotide binding
GO:0001579 IEA medium-chain fatty acid transport
GO:0001676 IDA long-chain fatty acid metabolic process
GO:0003824 IEA catalytic activity
GO:0004467 IDA long-chain fatty acid-CoA ligase activity
GO:0005783 IEA endoplasmic reticulum
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005886 TAS plasma membrane
GO:0005902 IEA microvillus
GO:0006629 TAS lipid metabolic process
GO:0006631 IEA fatty acid metabolic process
GO:0006810 TAS transport
GO:0007584 IEA response to nutrient
GO:0008152 IEA metabolic process
GO:0015245 TAS fatty acid transporter activity
GO:0015908 TAS fatty acid transport
GO:0015909 TAS long-chain fatty acid transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0031526 IEA brush border membrane
GO:0031957 IEA very long-chain fatty acid-CoA ligase activity
GO:0042760 IEA very long-chain fatty acid catabolic process
GO:0043588 IEA skin development
GO:0044539 IDA long-chain fatty acid import
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017047 slc27a4 solute carrier family 27 (fatty acid transporter), member 4 protein_coding Danio_rerio
ENSMUSG00000059316 Slc27a4 solute carrier family 27 (fatty acid transporter), member 4 protein_coding Mus_musculus

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