C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 15 open reading frame 39
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167173 C15orf39 9606 + 15:75195643-75212169 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000360639 C15orf39-001 75198892-75212169 protein_coding
  ENST00000394987 C15orf39-002 75201877-75212169 protein_coding
  ENST00000562637 C15orf39-006 75198866-75206135 protein_coding
  ENST00000563905 C15orf39-005 75195643-75206112 protein_coding
  ENST00000564848 C15orf39-007 75202205-75206129 protein_coding
  ENST00000565074 C15orf39-008 75206444-75209595 protein_coding
  ENST00000567617 C15orf39-004 75206049-75212169 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000360639ENST00000394987ENST00000565074ENST00000567617
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000360639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.142±0.00
ENST00000394987 8.592±0.00 5.506±0.00 0.249±0.00 0.317±0.17 3.012±0.00 1.298±1.08 0.742±0.00 1.690±1.41 N/A 4.569±3.32 N/A 8.436±7.00 9.885±4.43 37.289±0.00
ENST00000565074 N/A N/A 0.196±0.00 0.274±0.00 N/A N/A N/A 0.522±0.14 N/A N/A N/A N/A 4.393±0.00 25.398±0.00
ENST00000567617 2.139±0.00 3.381±0.00 N/A 0.531±0.00 0.460±0.32 1.713±0.00 0.465±0.00 N/A 0.150±0.00 3.018±0.00 1.761±0.00 4.940±2.50 7.050±1.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069168 C18H15orf39 chromosome 15 open reading frame 39 protein_coding Danio_rerio
ENSMUSG00000032300 1700017B05Rik RIKEN cDNA 1700017B05 gene protein_coding Mus_musculus

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