C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coronin 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167549 CORO6 9606 - 17:29614756-29622907 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000345068 CORO6-001 29614762-29622899 protein_coding
  ENST00000388767 CORO6-201 29614756-29621423 protein_coding
  ENST00000459686 CORO6-004 29614763-29622899 retained_intron
  ENST00000467534 CORO6-005 29614978-29622842 retained_intron
  ENST00000469090 CORO6-006 29614756-29618117 retained_intron
  ENST00000480954 CORO6-002 29614983-29618117 nonsense_mediated_decay
  ENST00000492276 CORO6-003 29618827-29622896 protein_coding
  ENST00000577909 CORO6-010 29616108-29622907 processed_transcript
  ENST00000579388 CORO6-007 29614978-29617469 retained_intron
  ENST00000580212 CORO6-008 29614765-29621500 protein_coding
  ENST00000584602 CORO6-011 29618883-29622904 protein_coding
  ENST00000584969 CORO6-009 29615732-29621421 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMusclePlacentaTestisENST00000345068ENST00000388767ENST00000459686ENST00000467534ENST00000469090ENST00000480954ENST00000492276ENST00000579388ENST00000584602ENST00000584969
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Placenta Testis
ENST00000345068 N/A N/A N/A N/A 1.820±0.00 N/A 2.014±1.20 N/A N/A N/A 51.939±0.00 N/A N/A
ENST00000388767 N/A 0.519±0.00 N/A N/A N/A N/A 7.310±0.00 N/A N/A N/A 101.542±0.00 4.457±0.42 2.344±0.00
ENST00000459686 N/A 0.368±0.00 N/A 1.059±0.00 0.822±0.00 N/A 1.904±0.00 N/A 0.073±0.00 0.484±0.00 N/A 2.824±0.67 N/A
ENST00000467534 1.201±0.00 N/A N/A 4.125±0.00 0.954±0.00 N/A N/A 0.331±0.00 N/A 0.558±0.00 N/A 4.116±0.70 N/A
ENST00000469090 N/A N/A N/A N/A 0.474±0.00 N/A N/A N/A N/A N/A N/A 5.264±1.34 N/A
ENST00000480954 N/A N/A N/A N/A 2.797±0.00 0.477±0.00 5.529±0.00 N/A 0.135±0.00 1.209±0.00 84.457±0.00 9.573±0.83 4.331±0.00
ENST00000492276 N/A N/A N/A N/A 1.178±0.00 N/A N/A N/A 1.991±0.00 N/A N/A N/A N/A
ENST00000579388 N/A 0.710±0.00 N/A N/A N/A N/A N/A N/A 0.151±0.00 N/A N/A N/A N/A
ENST00000584602 N/A N/A 0.281±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584969 N/A N/A N/A N/A N/A N/A 1.014±0.00 N/A N/A N/A 9.676±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009BZ CIL_0009BZ_0001 VISTA 17:29367684-29969856
CIL_000873 CIL_000873_0001 VISTA 17:29367702-29969870
CIL_0004GJ CIL_0004GJ_0002 CGP 17:29573469-29614761

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0015629 IBA actin cytoskeleton
GO:0030036 IBA actin cytoskeleton organization
GO:0051015 IBA actin filament binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040391 coro6 coronin 6 protein_coding Danio_rerio
ENSMUSG00000020836 Coro6 coronin 6 protein_coding Mus_musculus

Loading