C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 57, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167695 FAM57A 9606 + 17:732412-742972 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000301324 FAM57A-002 732584-742841 protein_coding
  ENST00000308278 FAM57A-001 732412-742972 protein_coding
  ENST00000570699 FAM57A-003 732677-742883 nonsense_mediated_decay
  ENST00000570892 FAM57A-007 741664-742884 processed_transcript
  ENST00000572018 FAM57A-005 732546-741365 protein_coding
  ENST00000574327 FAM57A-004 732412-740586 nonsense_mediated_decay
  ENST00000577008 FAM57A-006 733125-742014 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000301324ENST00000308278ENST00000570699ENST00000570892ENST00000577008
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000301324 0.719±0.00 N/A N/A 1.180±0.00 N/A 1.802±0.00 N/A 0.891±0.61 0.331±0.00 1.018±0.00 0.299±0.00 2.339±0.85 2.427±0.52 1.356±0.00
ENST00000308278 0.795±0.00 0.891±0.00 N/A N/A 1.515±0.07 0.329±0.00 0.347±0.01 0.345±0.00 N/A 0.527±0.00 0.113±0.00 5.339±3.09 2.629±1.19 0.807±0.33
ENST00000570699 2.937±0.00 2.518±0.00 N/A 1.457±0.00 0.954±0.57 0.849±0.16 0.981±0.00 0.895±0.00 0.231±0.00 1.032±0.45 N/A 3.869±1.78 1.354±0.37 1.922±0.00
ENST00000570892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.807±0.00 N/A N/A N/A
ENST00000577008 N/A N/A 0.492±0.00 N/A 0.788±0.00 0.781±0.00 1.001±0.00 0.797±0.00 N/A N/A N/A N/A N/A 1.816±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QB CIL_0001QB_0001 CGP 17:732412-753999

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000069808 Fam57a family with sequence similarity 57, member A protein_coding Mus_musculus

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