C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thymidine kinase 1, soluble
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167900 TK1 9606 - 17:78174075-78187233 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000301634 TK1-001 78174075-78187233 protein_coding
  ENST00000586613 TK1-004 78174926-78187063 protein_coding
  ENST00000588734 TK1-002 78174121-78187233 protein_coding
  ENST00000590430 TK1-005 78174830-78187038 protein_coding
  ENST00000590862 TK1-006 78174702-78187036 protein_coding
  ENST00000592126 TK1-003 78175069-78187021 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000301634ENST00000586613ENST00000588734ENST00000590862ENST00000592126
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000301634 1.389±0.00 2.028±0.00 0.486±0.00 1.974±0.00 3.570±0.00 0.533±0.42 10.320±0.00 N/A 5.670±0.00 N/A 9.257±8.87 14.840±4.43 2.061±0.20
ENST00000586613 N/A N/A N/A N/A N/A N/A N/A N/A 0.552±0.00 N/A 1.122±0.00 N/A N/A
ENST00000588734 N/A 1.034±0.00 N/A N/A N/A N/A N/A 0.112±0.00 1.235±0.00 0.198±0.00 0.519±0.00 N/A 0.358±0.00
ENST00000590862 0.735±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592126 N/A N/A N/A 0.438±0.00 N/A N/A N/A N/A N/A 0.511±0.00 14.531±0.00 8.807±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YS CIL_0007YS_0001 VISTA 17:77940736-78544976
CIL_0003UA CIL_0003UA_0002 CGP 17:78168558-78187233
CIL_0003U7 CIL_0003U7_0002 CGP 17:78174075-78207701

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001889 IEA liver development
GO:0004797 IEA thymidine kinase activity
GO:0005524 IEA ATP binding
GO:0005829 TAS cytosol
GO:0006139 TAS nucleobase-containing compound metabolic process
GO:0006206 TAS pyrimidine nucleobase metabolic process
GO:0008270 IDA zinc ion binding
GO:0009157 IEA deoxyribonucleoside monophosphate biosynthetic process
GO:0009165 EXP nucleotide biosynthetic process
GO:0009636 IEA response to toxic substance
GO:0014856 IEA skeletal muscle cell proliferation
GO:0016310 IEA phosphorylation
GO:0019206 EXP nucleoside kinase activity
GO:0031667 IEA response to nutrient levels
GO:0042802 IPI identical protein binding
GO:0043097 TAS pyrimidine nucleoside salvage
GO:0044281 TAS small molecule metabolic process
GO:0046104 IEA thymidine metabolic process
GO:0046688 IEA response to copper ion
GO:0048565 IEA digestive tract development
GO:0051289 IPI protein homotetramerization
GO:0051414 IEA response to cortisol
GO:0055086 TAS nucleobase-containing small molecule metabolic process
GO:0060138 IEA fetal process involved in parturition
GO:0071897 IEA DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086561 tk1 thymidine kinase 1, soluble protein_coding Danio_rerio
ENSMUSG00000025574 Tk1 thymidine kinase 1 protein_coding Mus_musculus

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