C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: succinate dehydrogenase complex assembly factor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167985 SDHAF2 9606 + 11:61430042-61447529 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000301761 SDHAF2-001 61430073-61447529 protein_coding
  ENST00000359614 SDHAF2-011 61430125-61446005 nonsense_mediated_decay
  ENST00000534878 SDHAF2-005 61430124-61438243 protein_coding
  ENST00000536250 SDHAF2-004 61430131-61438186 nonsense_mediated_decay
  ENST00000537782 SDHAF2-010 61430125-61446059 protein_coding
  ENST00000542074 SDHAF2-006 61430105-61446697 protein_coding
  ENST00000542794 SDHAF2-003 61430042-61446342 nonsense_mediated_decay
  ENST00000543265 SDHAF2-007 61430144-61446115 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverPlacentaENST00000301761ENST00000542074
Transcript ID Adrenal Breast Colon Heart Kidney Liver Placenta
ENST00000301761 N/A N/A 4.163±0.00 0.972±0.00 N/A N/A N/A
ENST00000542074 32.394±0.00 20.335±0.00 12.662±0.00 16.067±0.00 14.629±9.32 24.696±0.00 20.906±4.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WT CIL_0007WT_0001 VISTA 11:61244303-61847279

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005739 IEA:IDA mitochondrion
GO:0006121 IMP mitochondrial electron transport, succinate to ubiquinone
GO:0006470 IGI protein dephosphorylation
GO:0010719 IMP negative regulation of epithelial to mesenchymal transition
GO:0018293 IEA:IMP protein-FAD linkage
GO:0090090 IGI negative regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062971 sdhaf2 succinate dehydrogenase complex assembly factor 2 protein_coding Danio_rerio
ENSMUSG00000024668 Sdhaf2 succinate dehydrogenase complex assembly factor 2 protein_coding Mus_musculus

Loading