C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: von Willebrand factor C and EGF domains
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167992 VWCE 9606 - 11:61258286-61295424 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000301770 VWCE-002 61258286-61295091 nonsense_mediated_decay
  ENST00000335613 VWCE-001 61258290-61295424 protein_coding
  ENST00000398808 VWCE-005 61271165-61273319 retained_intron
  ENST00000535599 VWCE-003 61282498-61295095 nonsense_mediated_decay
  ENST00000535710 VWCE-004 61258624-61273806 protein_coding
  ENST00000538438 VWCE-006 61259081-61269417 retained_intron
  ENST00000538579 VWCE-007 61286263-61295026 retained_intron
  ENST00000613271 VWCE-201 61258289-61291342 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000301770ENST00000335613ENST00000398808ENST00000535599ENST00000535710ENST00000538438ENST00000538579ENST00000613271
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000301770 N/A 0.232±0.00 N/A 0.574±0.00 N/A 0.173±0.00 N/A 0.323±0.00 N/A N/A N/A 2.327±0.00 N/A 1.172±0.00
ENST00000335613 N/A N/A N/A N/A 0.149±0.00 N/A N/A 0.186±0.00 0.296±0.00 N/A N/A 1.370±1.16 6.319±3.43 N/A
ENST00000398808 N/A 0.610±0.00 N/A 0.228±0.00 0.374±0.00 N/A N/A 0.747±0.00 N/A 0.292±0.14 N/A N/A N/A N/A
ENST00000535599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.535±0.00 N/A N/A N/A
ENST00000535710 N/A N/A N/A 0.499±0.13 N/A 0.487±0.00 N/A N/A 0.057±0.00 N/A 0.332±0.00 1.087±1.24 4.033±2.43 N/A
ENST00000538438 N/A N/A 0.212±0.00 0.587±0.00 N/A N/A N/A N/A N/A N/A N/A 0.153±0.00 N/A N/A
ENST00000538579 N/A N/A N/A N/A 0.108±0.00 N/A 0.154±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000613271 1.344±0.00 0.134±0.00 0.071±0.00 N/A 0.565±0.00 N/A 0.317±0.00 N/A 0.490±0.00 0.213±0.17 0.035±0.00 3.440±1.49 4.982±1.27 1.151±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WT CIL_0007WT_0001 VISTA 11:61244303-61847279

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000094648 von Willebrand factor C and EGF domains protein_coding Danio_rerio
ENSMUSG00000043789 Vwce von Willebrand factor C and EGF domains protein_coding Mus_musculus

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