C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: prepronociceptin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168081 PNOC 9606 + 8:28316986-28343355 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000301908 PNOC-001 28317132-28343355 protein_coding
  ENST00000518479 PNOC-004 28316986-28339376 protein_coding
  ENST00000519592 PNOC-003 28338648-28340208 retained_intron
  ENST00000522209 PNOC-002 28338648-28343355 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000301908ENST00000518479ENST00000519592ENST00000522209
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000301908 N/A 0.600±0.00 N/A N/A N/A N/A 0.156±0.00 0.451±0.28 N/A 0.406±0.00
ENST00000518479 N/A N/A 0.131±0.00 0.379±0.00 0.061±0.00 N/A N/A 1.234±0.00 0.046±0.00 N/A
ENST00000519592 N/A N/A 0.042±0.00 N/A 0.027±0.00 N/A N/A 0.064±0.00 N/A N/A
ENST00000522209 7.021±0.00 0.306±0.00 0.220±0.00 0.235±0.00 0.062±0.00 0.116±0.06 0.688±0.00 0.846±0.00 0.103±0.03 0.455±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000935 CIL_000935_0001 VISTA 8:28213350-28814343
CIL_00073D CIL_00073D_0002 CGP 8:28316986-28402701

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001515 IEA opioid peptide activity
GO:0005184 TAS neuropeptide hormone activity
GO:0005515 IPI protein binding
GO:0005576 IEA:TAS extracellular region
GO:0007165 TAS signal transduction
GO:0007218 IEA neuropeptide signaling pathway
GO:0007268 IEA synaptic transmission
GO:0007600 TAS sensory perception

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024189 pnocb prepronociceptin b protein_coding Danio_rerio
ENSDARG00000025024 pnoca prepronociceptin a protein_coding Danio_rerio
ENSMUSG00000045731 Pnoc prepronociceptin protein_coding Mus_musculus

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