C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ankyrin repeat and sterile alpha motif domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168096 ANKS3 9606 - 16:4696510-4734378 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000304283 ANKS3-001 4696512-4734162 protein_coding
  ENST00000446014 ANKS3-201 4696512-4730246 protein_coding
  ENST00000450067 ANKS3-202 4696510-4734377 protein_coding
  ENST00000585773 ANKS3-006 4696857-4734249 protein_coding
  ENST00000586159 ANKS3-011 4705121-4734378 nonsense_mediated_decay
  ENST00000586166 ANKS3-015 4701118-4734264 protein_coding
  ENST00000586605 ANKS3-014 4700970-4734330 protein_coding
  ENST00000586632 ANKS3-029 4705210-4725122 retained_intron
  ENST00000587005 ANKS3-020 4724792-4734192 nonsense_mediated_decay
  ENST00000588398 ANKS3-028 4698143-4699195 retained_intron
  ENST00000588513 ANKS3-027 4697353-4705230 protein_coding
  ENST00000589035 ANKS3-009 4696512-4700303 retained_intron
  ENST00000589065 ANKS3-025 4705243-4734247 protein_coding
  ENST00000590147 ANKS3-023 4724825-4734160 protein_coding
  ENST00000590193 ANKS3-003 4696512-4734199 nonsense_mediated_decay
  ENST00000590689 ANKS3-002 4729358-4734195 retained_intron
  ENST00000590730 ANKS3-005 4699754-4734254 nonsense_mediated_decay
  ENST00000590803 ANKS3-008 4696512-4727169 retained_intron
  ENST00000591185 ANKS3-010 4696512-4700170 retained_intron
  ENST00000591281 ANKS3-019 4717439-4734204 nonsense_mediated_decay
  ENST00000591653 ANKS3-007 4696512-4728078 retained_intron
  ENST00000592068 ANKS3-022 4701051-4734192 nonsense_mediated_decay
  ENST00000592077 ANKS3-004 4696512-4734219 nonsense_mediated_decay
  ENST00000592190 ANKS3-018 4726659-4734228 protein_coding
  ENST00000592421 ANKS3-012 4700979-4734345 protein_coding
  ENST00000592698 ANKS3-016 4702167-4734263 protein_coding
  ENST00000592711 ANKS3-024 4714156-4734127 protein_coding
  ENST00000592840 ANKS3-026 4699505-4701620 retained_intron
  ENST00000593120 ANKS3-021 4714016-4734192 retained_intron
  ENST00000614075 ANKS3-203 4696510-4730167 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000450067ENST00000585773ENST00000586632ENST00000590193ENST00000590689ENST00000590730ENST00000591185ENST00000591653ENST00000592077ENST00000592190ENST00000592698ENST00000614075
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000450067 N/A N/A 3.172±0.00 3.345±0.00 N/A N/A 5.246±0.00 N/A N/A N/A 11.848±0.00 1.447±0.00
ENST00000585773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.407±0.00 N/A
ENST00000586632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.445±0.00 N/A
ENST00000590193 N/A N/A N/A N/A 2.006±0.00 N/A N/A 0.596±0.00 N/A N/A 4.285±0.63 1.563±0.35
ENST00000590689 N/A N/A N/A 1.603±0.00 N/A N/A N/A N/A 1.864±0.00 N/A 0.892±0.00 N/A
ENST00000590730 N/A N/A N/A N/A N/A N/A N/A 0.931±0.00 N/A N/A N/A N/A
ENST00000591185 N/A N/A N/A N/A N/A N/A 0.426±0.00 N/A N/A N/A 3.503±0.00 N/A
ENST00000591653 N/A 0.405±0.00 1.478±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592077 4.285±0.00 N/A N/A N/A N/A 0.928±0.00 N/A N/A N/A N/A N/A 1.623±0.00
ENST00000592190 N/A N/A N/A N/A N/A N/A 1.815±0.00 N/A N/A 2.245±0.00 N/A N/A
ENST00000592698 N/A N/A N/A N/A N/A N/A N/A N/A 1.438±0.00 N/A N/A N/A
ENST00000614075 N/A N/A N/A N/A N/A N/A 5.441±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IL CIL_0001IL_0001 CGP 16:4693694-4734378
CIL_00004X CIL_00004X_0001 CGP 16:4696510-4749396

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038557 ANKS3 ankyrin repeat and sterile alpha motif domain containing 3 protein_coding Danio_rerio
ENSMUSG00000022515 Anks3 ankyrin repeat and sterile alpha motif domain containing 3 protein_coding Mus_musculus

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