C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: receptor accessory protein 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168476 REEP4 9606 - 8:22138020-22141951 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000306306 REEP4-001 22138020-22141951 protein_coding
  ENST00000334530 REEP4-002 22138020-22141853 protein_coding
  ENST00000518664 REEP4-009 22138903-22141902 retained_intron
  ENST00000519074 REEP4-003 22138907-22141768 retained_intron
  ENST00000519875 REEP4-005 22139802-22141769 retained_intron
  ENST00000521744 REEP4-007 22140206-22141951 protein_coding
  ENST00000523293 REEP4-004 22138251-22141540 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306306ENST00000334530ENST00000518664ENST00000519074ENST00000519875ENST00000521744ENST00000523293
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306306 N/A 7.448±0.00 N/A 1.318±0.00 3.100±0.00 2.220±1.76 1.452±0.00 6.603±0.00 1.039±0.03 2.580±2.44 N/A 4.335±3.02 29.469±0.71 14.528±1.12
ENST00000334530 1.760±0.00 N/A N/A 0.212±0.00 1.873±0.00 2.995±0.00 0.294±0.16 N/A 1.959±0.00 3.436±0.00 1.605±0.00 7.585±5.31 19.317±0.00 17.992±6.38
ENST00000518664 3.836±0.00 N/A N/A 0.301±0.00 N/A 2.416±0.00 N/A 0.509±0.00 N/A N/A 0.396±0.00 6.557±0.00 10.089±0.00 12.211±0.00
ENST00000519074 N/A 2.756±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.133±0.00 N/A N/A
ENST00000519875 N/A N/A N/A N/A N/A N/A 0.201±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000521744 N/A N/A 0.169±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.243±0.00 N/A N/A
ENST00000523293 2.477±0.00 N/A N/A 1.285±0.00 N/A N/A N/A N/A 0.360±0.00 N/A N/A 0.501±0.00 N/A 5.884±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000810 CIL_000810_0001 VISTA 8:21687877-22288944
CIL_0008ZI CIL_0008ZI_0001 VISTA 8:21743578-22344815
CIL_000812 CIL_000812_0001 VISTA 8:21749915-22350771

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IDA endoplasmic reticulum
GO:0005874 IEA microtubule
GO:0006998 IMP nuclear envelope organization
GO:0007067 IEA mitotic nuclear division
GO:0007084 IMP mitotic nuclear envelope reassembly
GO:0008017 ISS microtubule binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000033589 Reep4 receptor accessory protein 4 protein_coding Mus_musculus

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