C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dynein, light chain, roadblock-type 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168589 DYNLRB2 9606 + 16:80540734-80550760 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000305904 DYNLRB2-001 80540957-80550644 protein_coding
  ENST00000338542 DYNLRB2-002 80541025-80550639 nonsense_mediated_decay
  ENST00000561880 DYNLRB2-003 80541028-80550648 nonsense_mediated_decay
  ENST00000562982 DYNLRB2-004 80540734-80550641 protein_coding
  ENST00000568035 DYNLRB2-006 80540993-80550760 protein_coding
  ENST00000570222 DYNLRB2-005 80544699-80550644 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000305904ENST00000338542ENST00000561880ENST00000562982ENST00000568035ENST00000570222
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000305904 0.615±0.00 N/A 0.730±0.46 0.247±0.00 0.552±0.00 0.121±0.00 1.597±0.00 6.862±4.56 8.634±7.24 N/A 74.619±38.48
ENST00000338542 N/A N/A N/A N/A N/A N/A N/A N/A 0.366±0.00 N/A N/A
ENST00000561880 N/A N/A N/A N/A N/A N/A N/A N/A 0.021±0.00 N/A N/A
ENST00000562982 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.523±0.27 N/A
ENST00000568035 N/A N/A 0.927±0.00 N/A N/A 0.032±0.00 N/A N/A N/A 0.166±0.08 N/A
ENST00000570222 N/A 0.301±0.00 1.586±0.00 0.726±0.00 0.149±0.00 N/A N/A 3.675±0.00 N/A 0.325±0.09 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003Z4 CIL_0003Z4_0001 CGP 16:79585843-80550760
CIL_0008MS CIL_0008MS_0001 VISTA 16:80038696-80639858
CIL_0008HN CIL_0008HN_0001 VISTA 16:80089446-80690755
CIL_0001Q8 CIL_0001Q8_0001 CGP 16:80540734-80804329

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003777 NAS microtubule motor activity
GO:0005515 IEA protein binding
GO:0005868 ISS cytoplasmic dynein complex
GO:0005874 IEA microtubule
GO:0006810 IEA transport
GO:0007018 NAS microtubule-based movement
GO:0008152 IEA metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089952 DYNLRB2 dynein, light chain, roadblock-type 2 protein_coding Danio_rerio
ENSMUSG00000034467 Dynlrb2 dynein light chain roadblock-type 2 protein_coding Mus_musculus

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