C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: von Willebrand factor A domain containing 3B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168658 VWA3B 9606 + 2:98087116-98313299 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000409460 VWA3B-004 98087190-98292103 retained_intron
  ENST00000416277 VWA3B-005 98087236-98236805 nonsense_mediated_decay
  ENST00000422503 VWA3B-021 98087236-98216964 nonsense_mediated_decay
  ENST00000432242 VWA3B-001 98087116-98313299 nonsense_mediated_decay
  ENST00000433678 VWA3B-002 98087177-98228961 nonsense_mediated_decay
  ENST00000448079 VWA3B-011 98087185-98133897 processed_transcript
  ENST00000448638 VWA3B-003 98087190-98236808 nonsense_mediated_decay
  ENST00000463635 VWA3B-014 98119609-98122100 processed_transcript
  ENST00000465555 VWA3B-009 98236633-98250423 protein_coding
  ENST00000465930 VWA3B-015 98128153-98133982 retained_intron
  ENST00000466852 VWA3B-017 98192286-98212171 retained_intron
  ENST00000473149 VWA3B-007 98211962-98312940 protein_coding
  ENST00000477737 VWA3B-020 98087192-98312714 protein_coding
  ENST00000483669 VWA3B-013 98087236-98121412 processed_transcript
  ENST00000484571 VWA3B-012 98087236-98119661 processed_transcript
  ENST00000485216 VWA3B-018 98230136-98236804 processed_transcript
  ENST00000489630 VWA3B-008 98211962-98312939 nonsense_mediated_decay
  ENST00000489968 VWA3B-016 98192270-98217960 processed_transcript
  ENST00000490947 VWA3B-010 98245433-98312940 processed_transcript
  ENST00000495571 VWA3B-006 98192991-98312947 nonsense_mediated_decay
  ENST00000614454 VWA3B-201 98245433-98312946 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000409460ENST00000416277ENST00000422503ENST00000433678ENST00000448638ENST00000463635ENST00000466852ENST00000473149ENST00000477737ENST00000483669ENST00000484571ENST00000485216ENST00000489630ENST00000489968ENST00000490947ENST00000614454
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000409460 0.013±0.00 0.022±0.00 N/A 0.005±0.00 0.027±0.00 0.004±0.00 0.058±0.02 0.002±0.00 0.168±0.00 N/A N/A N/A N/A
ENST00000416277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.728±0.00
ENST00000422503 N/A N/A 0.032±0.00 0.012±0.00 N/A N/A N/A N/A 1.956±0.00 0.098±0.00 N/A 0.040±0.00 N/A
ENST00000433678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.892±0.00
ENST00000448638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.228±0.00 N/A N/A
ENST00000463635 N/A N/A 0.246±0.00 N/A 3.149±0.00 N/A N/A N/A N/A N/A 0.758±0.53 N/A N/A
ENST00000466852 N/A N/A N/A 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A
ENST00000473149 N/A N/A 0.159±0.00 N/A N/A N/A N/A N/A 1.466±0.00 N/A 0.604±0.52 N/A 3.083±0.00
ENST00000477737 N/A N/A N/A N/A N/A N/A N/A N/A 2.658±0.00 N/A 1.356±1.30 0.013±0.00 4.475±0.00
ENST00000483669 N/A N/A N/A N/A 0.305±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484571 N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A N/A N/A 0.158±0.00 0.032±0.00 N/A
ENST00000485216 N/A N/A N/A N/A 0.089±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489630 0.012±0.00 0.029±0.00 0.027±0.00 N/A N/A 0.032±0.00 0.042±0.00 N/A 1.886±0.00 0.065±0.00 1.249±0.00 0.046±0.00 N/A
ENST00000489968 N/A 0.371±0.00 0.494±0.00 N/A N/A 0.209±0.07 0.095±0.00 N/A N/A N/A N/A N/A N/A
ENST00000490947 0.039±0.00 N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A 0.057±0.00 N/A
ENST00000614454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.291±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002UA CIL_0002UA_0001 CGP 2:97756333-98313299

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000050122 Vwa3b von Willebrand factor A domain containing 3B protein_coding Mus_musculus

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