C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168872 DDX19A 9606 + 16:70299224-70373383 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000302243 DDX19A-001 70346829-70373383 protein_coding
  ENST00000417604 DDX19A-004 70346944-70372297 protein_coding
  ENST00000443119 DDX19A-201 70299224-70372582 protein_coding
  ENST00000561574 DDX19A-011 70346905-70361498 nonsense_mediated_decay
  ENST00000562140 DDX19A-017 70364543-70373070 retained_intron
  ENST00000562509 DDX19A-005 70346861-70361496 processed_transcript
  ENST00000562649 DDX19A-012 70346905-70364643 nonsense_mediated_decay
  ENST00000565195 DDX19A-013 70346871-70355843 retained_intron
  ENST00000566167 DDX19A-009 70346896-70361510 nonsense_mediated_decay
  ENST00000566574 DDX19A-008 70363301-70373376 retained_intron
  ENST00000567012 DDX19A-006 70355895-70366794 retained_intron
  ENST00000568779 DDX19A-015 70364131-70366184 retained_intron
  ENST00000569244 DDX19A-018 70346901-70360865 processed_transcript
  ENST00000569319 DDX19A-003 70346905-70372089 nonsense_mediated_decay
  ENST00000569771 DDX19A-002 70346883-70373381 nonsense_mediated_decay
  ENST00000575878 DDX19A-007 70356861-70372329 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000302243ENST00000562140ENST00000566574ENST00000569771
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000302243 9.031±0.00 8.796±0.00 1.411±0.00 4.141±1.85 8.057±0.00 8.667±0.00 3.624±2.88 5.488±3.21 4.719±1.60 2.574±0.63 11.653±8.83 8.706±3.98 11.302±5.31 6.806±0.00
ENST00000562140 N/A N/A 1.006±0.00 N/A N/A 0.748±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566574 N/A 2.656±0.00 0.684±0.00 1.235±0.75 0.975±0.00 0.546±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569771 N/A N/A N/A N/A 2.198±0.00 1.593±0.00 0.630±0.00 N/A N/A 2.192±0.45 N/A 1.992±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0005643 IEA nuclear pore
GO:0005737 IDA cytoplasm
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0010043 IEA response to zinc ion
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0043065 IEA positive regulation of apoptotic process
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005699 ddx19 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) protein_coding Danio_rerio
ENSMUSG00000015023 Ddx19a DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a protein_coding Mus_musculus

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