C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 8 open reading frame 46
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169085 C8orf46 9606 + 8:66460003-66518524 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000305454 C8orf46-001 66493208-66518524 protein_coding
  ENST00000450307 C8orf46-013 66493562-66518498 nonsense_mediated_decay
  ENST00000460144 C8orf46-003 66493561-66518524 nonsense_mediated_decay
  ENST00000470796 C8orf46-011 66473784-66505468 processed_transcript
  ENST00000480005 C8orf46-006 66493627-66514040 protein_coding
  ENST00000482608 C8orf46-009 66460003-66513607 processed_transcript
  ENST00000484919 C8orf46-005 66493592-66510340 retained_intron
  ENST00000485639 C8orf46-007 66493651-66514291 processed_transcript
  ENST00000488582 C8orf46-008 66494544-66496494 processed_transcript
  ENST00000490228 C8orf46-010 66473878-66474939 processed_transcript
  ENST00000498712 C8orf46-012 66471441-66474939 processed_transcript
  ENST00000519702 C8orf46-019 66460304-66515930 processed_transcript
  ENST00000521495 C8orf46-017 66493520-66515978 protein_coding
  ENST00000521813 C8orf46-018 66493550-66503525 processed_transcript
  ENST00000522977 C8orf46-014 66493606-66516818 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonENST00000305454ENST00000450307ENST00000460144
Transcript ID Bladder Brain Colon
ENST00000305454 N/A 21.564±9.39 N/A
ENST00000450307 N/A N/A 1.255±0.00
ENST00000460144 1.149±0.00 9.093±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GC CIL_0003GC_0001 CGP 8:66429028-66471601
CIL_00031D CIL_00031D_0001 CGP 8:66430185-66518524
CIL_00031E CIL_00031E_0001 CGP 8:66460003-66614247

Gene Ontology

No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000067879 3110035E14Rik RIKEN cDNA 3110035E14 gene protein_coding Mus_musculus

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