C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: HSPB (heat shock 27kDa) associated protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169087 HSPBAP1 9606 - 3:122740003-122793824 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000306103 HSPBAP1-001 122740003-122793824 protein_coding
  ENST00000463266 HSPBAP1-006 122761534-122768742 processed_transcript
  ENST00000465044 HSPBAP1-003 122752861-122793714 processed_transcript
  ENST00000467643 HSPBAP1-002 122755324-122793759 processed_transcript
  ENST00000471534 HSPBAP1-004 122740003-122741776 processed_transcript
  ENST00000478601 HSPBAP1-005 122759220-122793660 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306103ENST00000465044ENST00000467643ENST00000471534
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306103 1.762±0.00 2.339±0.00 0.429±0.00 1.167±0.00 1.018±0.65 1.369±0.52 0.476±0.27 2.018±1.50 0.891±0.27 1.676±0.00 5.428±3.40 1.536±0.49 4.685±1.22 13.993±5.98
ENST00000465044 0.278±0.00 N/A 0.571±0.00 0.290±0.00 0.295±0.00 N/A 0.169±0.03 0.400±0.00 0.136±0.00 0.125±0.00 0.738±0.00 N/A N/A N/A
ENST00000467643 N/A N/A N/A N/A 1.275±0.00 N/A N/A N/A N/A N/A N/A 1.466±0.00 N/A N/A
ENST00000471534 0.360±0.00 1.840±0.00 0.923±0.00 0.407±0.07 0.983±0.05 0.474±0.00 0.178±0.00 0.747±0.16 0.543±0.45 1.721±0.00 0.423±0.00 0.959±0.73 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008J4 CIL_0008J4_0001 VISTA 3:122671455-123276444
CIL_0005BJ CIL_0005BJ_0002 CGP 3:122740003-122881139

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033771 hspbap1 hspb associated protein 1 protein_coding Danio_rerio
ENSMUSG00000022849 Hspbap1 Hspb associated protein 1 protein_coding Mus_musculus

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