C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RANBP2-like and GRIP domain containing 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169629 RGPD8 9606 - 2:112370092-112434488 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000302558 RGPD8-006 112370092-112433645 protein_coding
  ENST00000330575 RGPD8-007 112393051-112433530 protein_coding
  ENST00000409750 RGPD8-001 112370092-112434488 protein_coding
  ENST00000471422 RGPD8-005 112421536-112422616 retained_intron
  ENST00000482903 RGPD8-004 112400095-112401560 retained_intron
  ENST00000496537 RGPD8-003 112417777-112433519 protein_coding
  ENST00000522286 RGPD8-008 112390150-112422019 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000302558ENST00000409750
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000302558 N/A N/A 0.269±0.00 0.700±0.00 N/A 0.122±0.00 0.074±0.00 0.340±0.00 0.539±0.00 0.865±0.00 0.119±0.00 0.455±0.00 0.037±0.00 N/A
ENST00000409750 0.068±0.00 0.096±0.00 N/A 0.043±0.00 0.368±0.26 0.048±0.00 0.023±0.00 0.036±0.00 0.025±0.00 0.062±0.00 0.009±0.00 0.057±0.04 0.035±0.00 0.661±0.37

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000042 IEA protein targeting to Golgi
GO:0005515 IEA protein binding
GO:0005643 NAS nuclear pore
GO:0008150 ND biological_process
GO:0008536 NAS Ran GTPase binding
GO:0046907 IEA intracellular transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059270 ppie peptidylprolyl isomerase E (cyclophilin E) protein_coding Danio_rerio
ENSMUSG00000028651 Ppie peptidylprolyl isomerase E (cyclophilin E) protein_coding Mus_musculus

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