C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: one cut homeobox 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169856 ONECUT1 9606 - 15:52756989-52791078 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000305901 ONECUT1-001 52756989-52790012 protein_coding
  ENST00000560699 ONECUT1-003 52757440-52781183 protein_coding
  ENST00000561401 ONECUT1-002 52757315-52791078 processed_transcript
  ENST00000570208 ONECUT1-004 52785725-52789396 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLungOvaryTestisENST00000305901ENST00000560699ENST00000561401
Transcript ID Adipose Brain Breast Colon Heart Kidney Lung Ovary Testis
ENST00000305901 N/A 0.017±0.01 N/A 0.040±0.00 0.026±0.02 0.044±0.00 N/A 0.135±0.00 0.404±0.03
ENST00000560699 N/A N/A 0.043±0.00 N/A N/A N/A N/A N/A 0.079±0.00
ENST00000561401 0.044±0.00 0.100±0.00 N/A N/A N/A N/A 0.103±0.00 0.121±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007K3 CIL_0007K3_0001 UCNEbase 15:52752889-53754980

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001077 ISS RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001889 IEA liver development
GO:0001952 IEA regulation of cell-matrix adhesion
GO:0002064 IEA epithelial cell development
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006006 IEA glucose metabolic process
GO:0006351 IEA transcription, DNA-templated
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0007492 IEA endoderm development
GO:0009653 IEA anatomical structure morphogenesis
GO:0030154 IEA cell differentiation
GO:0030183 IEA B cell differentiation
GO:0030335 IEA positive regulation of cell migration
GO:0030512 IEA negative regulation of transforming growth factor beta receptor signaling pathway
GO:0031016 IEA pancreas development
GO:0031018 TAS endocrine pancreas development
GO:0042384 IEA cilium assembly
GO:0045165 IEA cell fate commitment
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0048536 IEA spleen development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007982 onecut1 one cut domain, family member 1 protein_coding Danio_rerio
ENSMUSG00000043013 Onecut1 one cut domain, family member 1 protein_coding Mus_musculus

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