C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 42
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169964 TMEM42 9606 + 3:44861869-44865670 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000302392 TMEM42-001 44861869-44865670 protein_coding
  ENST00000477126 TMEM42-002 44861904-44865670 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000302392ENST00000477126
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000302392 6.217±0.00 5.064±0.00 0.083±0.00 5.628±4.30 5.474±4.41 3.050±2.14 2.127±1.76 6.029±3.90 1.693±0.81 6.726±0.00 3.365±1.63 8.346±3.16 6.258±0.65 13.183±1.10
ENST00000477126 0.360±0.00 0.446±0.00 0.092±0.00 0.572±0.16 0.382±0.02 0.586±0.30 0.144±0.06 0.355±0.23 0.208±0.12 0.296±0.00 0.251±0.12 0.730±0.12 0.282±0.08 1.411±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006YD CIL_0006YD_0001 CGP 3:44737661-44873376
CIL_0006YZ CIL_0006YZ_0001 CGP 3:44761717-44873376
CIL_000741 CIL_000741_0001 CGP 3:44861869-44914990

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000066233 Tmem42 transmembrane protein 42 protein_coding Mus_musculus

Loading