C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 161, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170264 FAM161A 9606 - 2:61824854-61854143 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000307507 FAM161A-003 61836057-61854064 nonsense_mediated_decay
  ENST00000404929 FAM161A-005 61824856-61854053 protein_coding
  ENST00000405894 FAM161A-001 61824856-61854143 protein_coding
  ENST00000418113 FAM161A-004 61824856-61854028 nonsense_mediated_decay
  ENST00000456262 FAM161A-002 61824854-61854092 nonsense_mediated_decay
  ENST00000478494 FAM161A-009 61827104-61836484 retained_intron
  ENST00000496369 FAM161A-008 61835515-61839524 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000307507ENST00000404929ENST00000405894ENST00000418113ENST00000456262ENST00000478494ENST00000496369
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000307507 N/A N/A N/A 0.129±0.00 N/A N/A 0.107±0.00 N/A N/A N/A 0.105±0.00 N/A
ENST00000404929 N/A N/A N/A N/A 0.586±0.00 0.093±0.00 0.269±0.00 0.121±0.00 N/A 0.528±0.24 0.130±0.04 1.287±0.61
ENST00000405894 N/A 0.125±0.00 0.723±0.52 N/A N/A N/A N/A 0.211±0.11 0.631±0.00 0.737±0.39 0.119±0.02 1.375±0.23
ENST00000418113 0.349±0.00 0.126±0.00 0.510±0.00 0.123±0.03 N/A N/A 0.046±0.00 0.476±0.00 N/A 0.383±0.00 0.096±0.00 N/A
ENST00000456262 N/A N/A N/A 0.187±0.00 N/A 0.218±0.00 0.026±0.00 N/A N/A 0.468±0.00 0.089±0.00 0.716±0.00
ENST00000478494 N/A N/A N/A 0.319±0.00 N/A N/A N/A N/A N/A 1.009±0.00 0.390±0.00 N/A
ENST00000496369 N/A N/A N/A N/A N/A N/A 0.071±0.00 N/A N/A 1.194±0.00 0.951±0.00 18.989±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ZI CIL_0000ZI_0002 CGP 2:61477849-61854143
CIL_0000RH CIL_0000RH_0002 CGP 2:61824854-61888804

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089742 FAM161A family with sequence similarity 161, member A protein_coding Danio_rerio
ENSMUSG00000049811 Fam161a family with sequence similarity 161, member A protein_coding Mus_musculus

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