C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cyclic nucleotide gated channel beta 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170289 CNGB3 9606 - 8:86553977-86743675 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000320005 CNGB3-001 86573935-86743675 protein_coding
  ENST00000517327 CNGB3-003 86553977-86579206 protein_coding
  ENST00000519777 CNGB3-002 86703949-86743609 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyOvaryPlacentaTestisENST00000320005ENST00000517327ENST00000519777
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Ovary Placenta Testis
ENST00000320005 N/A N/A 0.009±0.00 0.043±0.01 N/A 0.030±0.01 0.005±0.00 0.023±0.02 0.022±0.00 0.294±0.00
ENST00000517327 0.087±0.00 0.489±0.00 N/A 0.112±0.00 0.410±0.31 N/A 0.151±0.00 0.070±0.00 N/A N/A
ENST00000519777 N/A N/A N/A N/A 0.314±0.00 0.026±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001750 IEA photoreceptor outer segment
GO:0005222 IBA intracellular cAMP activated cation channel activity
GO:0005223 IBA intracellular cGMP activated cation channel activity
GO:0005249 IBA voltage-gated potassium channel activity
GO:0005515 IEA protein binding
GO:0005887 IBA integral component of plasma membrane
GO:0006810 NAS transport
GO:0006812 IDA cation transport
GO:0007165 NAS signal transduction
GO:0007601 IEA visual perception
GO:0007603 IBA phototransduction, visible light
GO:0030553 IBA cGMP binding
GO:0042391 IBA regulation of membrane potential
GO:0071805 IBA potassium ion transmembrane transport
GO:1902495 IDA transmembrane transporter complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061945 cngb3 cyclic nucleotide gated channel beta 3 protein_coding Danio_rerio
ENSDARG00000087082 CNGB3 (2 of 2) cyclic nucleotide gated channel beta 3 protein_coding Danio_rerio
ENSMUSG00000056494 Cngb3 cyclic nucleotide gated channel beta 3 protein_coding Mus_musculus

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