C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat neuronal 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170382 LRRN2 9606 - 1:204617170-204685733 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000367175 LRRN2-003 204617170-204622205 protein_coding
  ENST00000367176 LRRN2-001 204617170-204685353 protein_coding
  ENST00000367177 LRRN2-002 204617170-204685733 protein_coding
  ENST00000496057 LRRN2-004 204619900-204685366 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367175ENST00000367176ENST00000367177
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367175 0.063±0.00 1.059±0.00 N/A N/A 0.132±0.00 0.114±0.01 0.111±0.05 0.032±0.00 0.048±0.01 0.144±0.03 0.048±0.01 0.245±0.20 0.034±0.01 0.233±0.08
ENST00000367176 N/A N/A 0.476±0.00 2.163±0.00 0.408±0.00 N/A 0.108±0.00 N/A 0.307±0.00 N/A N/A 0.331±0.00 N/A N/A
ENST00000367177 0.322±0.00 0.360±0.00 N/A 5.145±0.00 0.803±0.00 0.859±0.48 0.899±0.00 8.561±0.00 0.123±0.00 0.415±0.00 0.089±0.00 4.427±3.05 0.705±0.25 1.261±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084Z CIL_00084Z_0001 VISTA 1:204154830-204755807

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004872 TAS receptor activity
GO:0005515 IEA protein binding
GO:0007155 TAS cell adhesion
GO:0007165 TAS signal transduction
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062400 LRRN2 leucine rich repeat neuronal 2 protein_coding Danio_rerio
ENSMUSG00000026443 Lrrn2 leucine rich repeat protein 2, neuronal protein_coding Mus_musculus

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